Strain Fitness in Dechlorosoma suillum PS around Dsui_2296

Experiment: anaerobic ALP with 3 all (C)s and 5mM perchlorate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2295 and Dsui_2296 are separated by 304 nucleotidesDsui_2296 and Dsui_2297 are separated by 158 nucleotides Dsui_2295: Dsui_2295 - transcriptional regulator, at 2,449,202 to 2,449,843 _2295 Dsui_2296: Dsui_2296 - chemotaxis protein, at 2,450,148 to 2,450,747 _2296 Dsui_2297: Dsui_2297 - acetoacetyl-CoA synthase, at 2,450,906 to 2,452,876 _2297 Position (kb) 2450 2451Strain fitness (log2 ratio) -2 -1 0 1at 2449.162 kb on + strandat 2449.263 kb on + strandat 2449.506 kb on + strand, within Dsui_2295at 2449.890 kb on - strandat 2449.898 kb on + strandat 2450.150 kb on - strandat 2450.187 kb on + strandat 2450.214 kb on + strand, within Dsui_2296at 2450.420 kb on + strand, within Dsui_2296at 2450.487 kb on + strand, within Dsui_2296at 2450.563 kb on + strand, within Dsui_2296at 2450.674 kb on - strandat 2450.741 kb on + strandat 2450.839 kb on - strandat 2450.938 kb on + strandat 2450.992 kb on + strandat 2450.992 kb on - strandat 2451.061 kb on - strandat 2451.139 kb on + strand, within Dsui_2297at 2451.139 kb on + strand, within Dsui_2297at 2451.407 kb on + strandat 2451.437 kb on + strand, within Dsui_2297at 2451.528 kb on + strand, within Dsui_2297at 2451.563 kb on + strand, within Dsui_2297at 2451.574 kb on + strand, within Dsui_2297

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Per-strain Table

Position Strand Gene LocusTag Fraction anaerobic ALP with 3 all (C)s and 5mM perchlorate
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2,449,162 + -0.0
2,449,263 + -0.0
2,449,506 + Dsui_2295 0.47 -1.0
2,449,890 - -1.6
2,449,898 + -1.0
2,450,150 - -0.0
2,450,187 + +1.0
2,450,214 + Dsui_2296 0.11 -0.6
2,450,420 + Dsui_2296 0.45 +0.9
2,450,487 + Dsui_2296 0.56 +0.6
2,450,563 + Dsui_2296 0.69 +1.5
2,450,674 - -0.0
2,450,741 + +0.1
2,450,839 - -2.4
2,450,938 + +1.3
2,450,992 + -2.0
2,450,992 - +1.1
2,451,061 - +1.0
2,451,139 + Dsui_2297 0.12 -2.0
2,451,139 + Dsui_2297 0.12 -0.8
2,451,407 + -0.0
2,451,437 + Dsui_2297 0.27 -1.0
2,451,528 + Dsui_2297 0.32 -1.0
2,451,563 + Dsui_2297 0.33 +0.3
2,451,574 + Dsui_2297 0.34 -0.0

Or see this region's nucleotide sequence