Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01066

Experiment: PYE 0.5x 4C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 4C
1,169,077	+				-0.5
1,169,077	+				-1.5
1,169,078	-				-2.8
1,169,120	+		CCNA_01065	0.11	-1.2
1,169,120	+		CCNA_01065	0.11	-1.3
1,169,193	+		CCNA_01065	0.18	-0.8
1,169,213	+		CCNA_01065	0.20	-1.2
1,169,238	+		CCNA_01065	0.22	-3.2
1,169,238	+		CCNA_01065	0.22	-1.7
1,169,252	+		CCNA_01065	0.23	-2.4
1,169,267	-		CCNA_01065	0.25	-1.7
1,169,279	+		CCNA_01065	0.26	-1.3
1,169,279	+		CCNA_01065	0.26	-1.9
1,169,303	-		CCNA_01065	0.28	-1.7
1,169,318	-		CCNA_01065	0.30	-1.4
1,169,347	-		CCNA_01065	0.32	-2.2
1,169,347	-		CCNA_01065	0.32	-0.2
1,169,370	+		CCNA_01065	0.35	-0.3
1,169,552	+		CCNA_01065	0.52	-2.2
1,169,567	-		CCNA_01065	0.54	-2.5
1,169,573	+		CCNA_01065	0.54	-2.6
1,169,581	-		CCNA_01065	0.55	-2.3
1,169,602	+		CCNA_01065	0.57	-1.3
1,169,602	+		CCNA_01065	0.57	+0.3
1,169,604	+		CCNA_01065	0.57	-1.5
1,169,610	-		CCNA_01065	0.58	-0.8
1,169,640	+		CCNA_01065	0.61	-2.0
1,169,640	+		CCNA_01065	0.61	-1.5
1,169,657	+		CCNA_01065	0.62	+2.2
1,169,658	+		CCNA_01065	0.62	-0.9
1,169,665	-		CCNA_01065	0.63	+1.9
1,169,674	+		CCNA_01065	0.64	-1.1
1,169,701	-		CCNA_01065	0.67	+0.6
1,169,751	+		CCNA_01065	0.71	+0.2
1,169,759	-		CCNA_01065	0.72	-0.4
1,169,779	-		CCNA_01065	0.74	-1.8
1,169,786	-		CCNA_01065	0.75	-2.8
1,169,788	+		CCNA_01065	0.75	-1.0
1,169,802	+		CCNA_01065	0.76	+0.7
1,169,820	-		CCNA_01065	0.78	-0.6
1,169,870	+		CCNA_01065	0.83	+1.6
1,169,870	+		CCNA_01065	0.83	-0.5
1,169,878	-		CCNA_01065	0.84	-1.3
1,169,878	-		CCNA_01065	0.84	-1.4
1,169,889	+		CCNA_01065	0.85	-1.2
1,169,889	+		CCNA_01065	0.85	-0.9
1,169,889	+		CCNA_01065	0.85	-1.1
1,169,897	-		CCNA_01065	0.85	-6.4
1,169,897	-		CCNA_01065	0.85	-2.0
1,169,897	-		CCNA_01065	0.85	-0.5
1,169,902	+		CCNA_01065	0.86	-0.3
1,169,902	+		CCNA_01065	0.86	-0.7
1,169,921	+		CCNA_01065	0.88	-1.2
1,170,107	+				-1.0
1,170,143	+				-3.6
1,170,146	-				-3.2
1,170,169	-		CCNA_01066	0.11	-0.2
1,170,170	-		CCNA_01066	0.11	-0.1
1,170,181	+		CCNA_01066	0.12	-1.7
1,170,181	+		CCNA_01066	0.12	-1.2
1,170,181	+		CCNA_01066	0.12	-0.7
1,170,181	+		CCNA_01066	0.12	-1.0
1,170,183	-		CCNA_01066	0.12	-1.0
1,170,188	+		CCNA_01066	0.13	-1.6
1,170,193	-		CCNA_01066	0.13	-2.5
1,170,259	-		CCNA_01066	0.19	-1.5
1,170,340	+		CCNA_01066	0.27	-1.6
1,170,341	+		CCNA_01066	0.27	-1.4
1,170,341	+		CCNA_01066	0.27	-1.1
1,170,349	-		CCNA_01066	0.28	-1.1
1,170,349	-		CCNA_01066	0.28	-1.0
1,170,349	-		CCNA_01066	0.28	+0.2
1,170,351	+		CCNA_01066	0.28	-1.2
1,170,351	+		CCNA_01066	0.28	-2.4
1,170,359	-		CCNA_01066	0.29	-2.9
1,170,361	+		CCNA_01066	0.29	-1.0
1,170,361	+		CCNA_01066	0.29	-1.9
1,170,361	+		CCNA_01066	0.29	-1.4
1,170,369	-		CCNA_01066	0.30	+0.5
1,170,369	-		CCNA_01066	0.30	-1.1
1,170,390	+		CCNA_01066	0.32	-0.8
1,170,395	-		CCNA_01066	0.32	-1.2
1,170,421	+		CCNA_01066	0.35	-1.3
1,170,422	-		CCNA_01066	0.35	-0.1
1,170,475	+		CCNA_01066	0.40	-1.2
1,170,483	-		CCNA_01066	0.41	-0.9
1,170,483	-		CCNA_01066	0.41	-2.4
1,170,483	-		CCNA_01066	0.41	-1.5
1,170,495	+		CCNA_01066	0.42	-0.6
1,170,517	-		CCNA_01066	0.44	-1.6
1,170,602	-		CCNA_01066	0.52	+0.3
1,170,618	+		CCNA_01066	0.54	-0.0
1,170,618	-		CCNA_01066	0.54	-1.5
1,170,631	+		CCNA_01066	0.55	-1.3
1,170,631	+		CCNA_01066	0.55	-1.1
1,170,690	+		CCNA_01066	0.61	+0.5
1,170,690	+		CCNA_01066	0.61	-1.3
1,170,690	+		CCNA_01066	0.61	-0.9
1,170,690	+		CCNA_01066	0.61	-1.0
1,170,690	+		CCNA_01066	0.61	-0.4
1,170,692	-		CCNA_01066	0.61	-2.3
1,170,693	-		CCNA_01066	0.61	-0.2
1,170,698	-		CCNA_01066	0.62	-3.2
1,170,708	+		CCNA_01066	0.63	-0.6
1,170,732	-		CCNA_01066	0.65	-1.0
1,170,761	+		CCNA_01066	0.68	-2.2
1,170,769	-		CCNA_01066	0.68	-1.7
1,170,786	-		CCNA_01066	0.70	-2.5
1,170,802	+		CCNA_01066	0.72	-0.5
1,170,802	+		CCNA_01066	0.72	-0.7
1,170,802	+		CCNA_01066	0.72	-0.2
1,170,810	-		CCNA_01066	0.72	-1.5
1,170,812	+		CCNA_01066	0.73	+0.9
1,170,815	-		CCNA_01066	0.73	-0.6
1,170,839	+		CCNA_01066	0.75	-1.0
1,170,839	+		CCNA_01066	0.75	+0.3
1,170,839	+		CCNA_01066	0.75	-1.7
1,170,839	+		CCNA_01066	0.75	-0.1
1,170,839	+		CCNA_01066	0.75	-1.4
1,170,847	-		CCNA_01066	0.76	-2.5
1,170,874	+		CCNA_01066	0.79	-1.3
1,170,912	+		CCNA_01066	0.82	-0.7
1,170,920	-		CCNA_01066	0.83	-0.9
1,170,920	-		CCNA_01066	0.83	-2.7
1,170,926	+		CCNA_01066	0.84	-0.9
1,170,958	+		CCNA_01066	0.87	-0.9
1,170,958	+		CCNA_01066	0.87	-2.0
1,170,996	+				-1.4
1,171,037	+				-3.2
1,171,108	+				-0.1
1,171,121	+				+0.9
1,171,121	+				+0.8
1,171,131	+				+0.5
1,171,143	+				+0.9
1,171,197	+				-3.8
1,171,210	-				+1.9
1,171,233	+				-2.5
1,171,233	+				-3.8
1,171,233	+				-0.7
1,171,244	+				-0.4
1,171,245	+				-2.4
1,171,286	-				-0.1
1,171,296	+				-2.5
1,171,335	+		CCNA_01067	0.12	-3.7
1,171,336	+		CCNA_01067	0.12	-2.9
1,171,341	+		CCNA_01067	0.12	-1.9
1,171,349	-		CCNA_01067	0.12	+1.9
1,171,391	+		CCNA_01067	0.15	-5.1
1,171,391	+		CCNA_01067	0.15	-4.1
1,171,391	+		CCNA_01067	0.15	-3.3
1,171,391	+		CCNA_01067	0.15	-0.7
1,171,399	-		CCNA_01067	0.16	+1.9
1,171,403	+		CCNA_01067	0.16	-1.4
1,171,403	+		CCNA_01067	0.16	-1.7
1,171,411	-		CCNA_01067	0.16	-3.0
1,171,458	-		CCNA_01067	0.19	-0.4
1,171,462	+		CCNA_01067	0.20	-1.3
1,171,470	-		CCNA_01067	0.20	-1.1
1,171,526	+		CCNA_01067	0.24	-3.0
1,171,526	+		CCNA_01067	0.24	-3.2
1,171,526	+		CCNA_01067	0.24	-2.4
1,171,526	+		CCNA_01067	0.24	-1.4
1,171,526	+		CCNA_01067	0.24	-1.8
1,171,526	+		CCNA_01067	0.24	-3.9
1,171,526	+		CCNA_01067	0.24	-2.0
1,171,526	+		CCNA_01067	0.24	-3.4
1,171,526	+		CCNA_01067	0.24	-0.7
1,171,534	-		CCNA_01067	0.24	-0.4
1,171,534	-		CCNA_01067	0.24	-0.1
1,171,534	-		CCNA_01067	0.24	-0.7
1,171,534	-		CCNA_01067	0.24	-0.7
1,171,534	-		CCNA_01067	0.24	-0.7
1,171,539	+		CCNA_01067	0.24	-2.7
1,171,561	+		CCNA_01067	0.26	-3.2
1,171,569	+		CCNA_01067	0.26	-2.7
1,171,602	-		CCNA_01067	0.28	-1.5
1,171,615	+		CCNA_01067	0.29	-0.4
1,171,632	+		CCNA_01067	0.30	-2.3
1,171,680	+		CCNA_01067	0.33	-2.0
1,171,680	+		CCNA_01067	0.33	-1.7
1,171,685	+		CCNA_01067	0.34	-3.1
1,171,704	+		CCNA_01067	0.35	-2.6
1,171,719	+		CCNA_01067	0.36	-1.5
1,171,724	+		CCNA_01067	0.36	-2.5
1,171,724	+		CCNA_01067	0.36	-1.3
1,171,727	-		CCNA_01067	0.36	-0.1
1,171,750	+		CCNA_01067	0.38	-2.6
1,171,750	+		CCNA_01067	0.38	-3.1
1,171,753	-		CCNA_01067	0.38	-0.7
1,171,758	-		CCNA_01067	0.38	+0.3
1,171,806	+		CCNA_01067	0.41	-4.2
1,171,831	+		CCNA_01067	0.43	-1.8
1,171,862	+		CCNA_01067	0.45	-4.1
1,171,862	+		CCNA_01067	0.45	-3.7
1,171,862	+		CCNA_01067	0.45	-2.4
1,171,862	+		CCNA_01067	0.45	-4.5
1,172,004	+		CCNA_01067	0.54	-2.2
1,172,008	+		CCNA_01067	0.54	-2.8
1,172,079	+		CCNA_01067	0.59	-1.8