Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00133

Experiment: PYE 0.5x 4C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 4C
141,695	+				+1.4
141,700	+				+0.2
141,710	+				+0.6
141,722	+		CCNA_00132	0.11	-1.1
141,722	+		CCNA_00132	0.11	-0.3
141,769	+		CCNA_00132	0.17	+0.9
141,794	+		CCNA_00132	0.20	+1.3
141,808	+		CCNA_00132	0.22	+0.7
141,816	-		CCNA_00132	0.23	-1.6
141,851	-		CCNA_00132	0.27	-1.7
141,875	+		CCNA_00132	0.30	+0.2
141,890	-		CCNA_00132	0.32	-0.7
141,895	-		CCNA_00132	0.33	-1.0
141,909	-		CCNA_00132	0.34	+0.4
141,911	+		CCNA_00132	0.35	+0.2
141,911	+		CCNA_00132	0.35	-0.2
141,911	+		CCNA_00132	0.35	+0.3
141,912	+		CCNA_00132	0.35	+0.9
141,919	-		CCNA_00132	0.36	-0.4
141,919	-		CCNA_00132	0.36	-0.1
141,920	-		CCNA_00132	0.36	+0.9
141,920	-		CCNA_00132	0.36	-0.7
141,947	+		CCNA_00132	0.39	+0.6
141,947	+		CCNA_00132	0.39	+0.9
141,955	-		CCNA_00132	0.40	-0.6
141,955	-		CCNA_00132	0.40	+0.9
141,966	+		CCNA_00132	0.42	+1.9
141,966	+		CCNA_00132	0.42	+0.9
141,999	+		CCNA_00132	0.46	+1.5
142,013	+		CCNA_00132	0.47	+0.3
142,015	-		CCNA_00132	0.48	-0.7
142,024	+		CCNA_00132	0.49	-1.3
142,027	-		CCNA_00132	0.49	+0.4
142,068	-		CCNA_00132	0.54	-0.6
142,087	+		CCNA_00132	0.57	-1.2
142,095	-		CCNA_00132	0.58	-1.3
142,101	+		CCNA_00132	0.58	-0.3
142,109	-		CCNA_00132	0.59	-2.8
142,126	+		CCNA_00132	0.62	-2.9
142,132	-		CCNA_00132	0.62	-2.8
142,180	+		CCNA_00132	0.68	+0.8
142,183	-		CCNA_00132	0.69	+2.3
142,185	+		CCNA_00132	0.69	+0.0
142,193	-		CCNA_00132	0.70	-0.4
142,193	-		CCNA_00132	0.70	+1.3
142,193	-		CCNA_00132	0.70	-1.4
142,193	-		CCNA_00132	0.70	+0.9
142,245	-		CCNA_00132	0.76	+3.1
142,340	+		CCNA_00132	0.88	+1.0
142,340	+		CCNA_00132	0.88	+0.5
142,379	+				-1.6
142,386	+				+0.5
142,428	+				+0.6
142,436	-				-1.8
142,436	-				+1.7
142,436	-				-3.1
142,436	-				-2.3
142,522	-				+0.7
142,579	+				+3.4
142,580	+				+0.8
142,640	+				+0.4
142,665	-				-1.4
142,666	+				+0.1
142,690	+				+0.1
142,690	+				-2.1
142,690	+				-1.8
142,738	+				-0.3
142,739	+				-0.0
142,746	+				-1.9
142,772	-				-3.8
142,774	+				-3.0
142,782	-				-1.3
142,797	+				-0.4
142,812	+		CCNA_00133	0.11	-1.0
142,815	+		CCNA_00133	0.11	-3.5
142,820	+		CCNA_00133	0.12	-2.2
142,850	-				-1.6
142,912	-		CCNA_00133	0.19	-1.7
142,913	-		CCNA_00133	0.19	-1.3
142,923	+		CCNA_00133	0.20	-3.4
142,931	-		CCNA_00133	0.21	-1.1
142,976	+		CCNA_00133	0.24	-0.6
143,013	+		CCNA_00133	0.27	-2.3
143,044	-		CCNA_00133	0.30	-3.4
143,072	+		CCNA_00133	0.32	-2.4
143,085	-		CCNA_00133	0.33	-2.1
143,097	+		CCNA_00133	0.34	+1.1
143,097	+		CCNA_00133	0.34	-2.9
143,100	-		CCNA_00133	0.35	-2.4
143,102	+		CCNA_00133	0.35	-1.5
143,118	-		CCNA_00133	0.36	+0.1
143,133	-		CCNA_00133	0.37	+0.9
143,174	+		CCNA_00133	0.41	-1.0
143,206	-		CCNA_00133	0.43	+0.9
143,232	+		CCNA_00133	0.45	-2.4
143,232	+		CCNA_00133	0.45	-2.3
143,240	-		CCNA_00133	0.46	-1.7
143,260	-		CCNA_00133	0.48	-0.9
143,261	-		CCNA_00133	0.48	-1.1
143,422	+		CCNA_00133	0.61	-1.7
143,422	+		CCNA_00133	0.61	-3.3
143,515	+		CCNA_00133	0.69	-2.5
143,515	+		CCNA_00133	0.69	-1.0
143,515	+		CCNA_00133	0.69	-2.6
143,523	-		CCNA_00133	0.69	-1.6
143,525	+		CCNA_00133	0.70	-3.5
143,525	+		CCNA_00133	0.70	-1.1
143,525	+		CCNA_00133	0.70	-3.1
143,525	+		CCNA_00133	0.70	-3.4
143,525	+		CCNA_00133	0.70	-2.6
143,525	+		CCNA_00133	0.70	-1.1
143,525	+		CCNA_00133	0.70	-1.8
143,525	+		CCNA_00133	0.70	-1.8
143,533	-		CCNA_00133	0.70	-0.1
143,552	-		CCNA_00133	0.72	-1.2
143,559	+		CCNA_00133	0.72	-2.9
143,569	-		CCNA_00133	0.73	-3.7
143,582	+		CCNA_00133	0.74	-3.1
143,610	-		CCNA_00133	0.77	-2.7
143,611	-		CCNA_00133	0.77	-2.1
143,611	-		CCNA_00133	0.77	-0.4
143,611	-		CCNA_00133	0.77	-2.6
143,612	+		CCNA_00133	0.77	-0.2
143,612	+		CCNA_00133	0.77	-0.6
143,620	-		CCNA_00133	0.77	+0.3
143,632	+		CCNA_00133	0.78	+0.5
143,633	+		CCNA_00133	0.78	-1.1
143,656	-		CCNA_00133	0.80	+0.9
143,705	-		CCNA_00133	0.84	-1.6
143,720	+		CCNA_00133	0.86	-2.7
143,797	-				-0.9
143,831	-				+0.5
143,875	+				+1.2
143,889	+				-0.5
143,889	+				+0.7
143,889	+				+0.1
143,889	+				-0.2
143,889	+				+0.7
143,889	+				+0.1
143,889	+				+1.0
143,897	-				-1.0
143,897	-				+0.0
143,897	-				-1.7
143,920	+				-0.0
143,925	+				-0.6
143,944	+				-1.0
143,944	+				-2.6
143,949	+				-0.4
143,968	+				-0.0
144,016	+				+0.9
144,080	-		CCNA_00134	0.21	+1.9
144,130	+		CCNA_00134	0.33	-1.3
144,130	+		CCNA_00134	0.33	-2.1
144,180	+		CCNA_00134	0.45	-4.0
144,246	+		CCNA_00134	0.60	-2.7
144,306	+		CCNA_00134	0.74	-1.6
144,306	+		CCNA_00134	0.74	-2.0
144,306	+		CCNA_00134	0.74	-2.5
144,306	+		CCNA_00134	0.74	-1.9
144,306	+		CCNA_00134	0.74	+0.7
144,306	+		CCNA_00134	0.74	-1.9
144,314	-		CCNA_00134	0.76	+0.9
144,314	-		CCNA_00134	0.76	+0.9
144,368	+		CCNA_00134	0.88	-1.4
144,390	+				-1.3
144,393	-				+0.3
144,406	+				+0.3
144,428	+				+0.3
144,436	-				+0.9
144,445	+				+1.1
144,468	+				+0.9
144,470	-				-1.7
144,472	+				-1.1
144,472	+				+1.9
144,472	+				-0.7
144,472	+				-1.9
144,480	-				-4.1
144,480	-				+0.9
144,480	-				-0.1
144,487	+				-1.1
144,507	-				-0.9
144,771	-		CCNA_00135	0.39	-0.4
144,771	-		CCNA_00135	0.39	+1.9
144,771	-		CCNA_00135	0.39	-0.4
144,794	+		CCNA_00135	0.42	-0.1
144,811	-		CCNA_00135	0.44	+0.9
144,850	+		CCNA_00135	0.49	-1.9
144,872	+		CCNA_00135	0.51	-1.7
144,880	-		CCNA_00135	0.52	-2.9