Experiment: Manganese (II) chloride tetrahydrate 0.00078125 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_952 and Pf6N2E2_953 overlap by 11 nucleotides Pf6N2E2_953 and Pf6N2E2_954 are separated by 125 nucleotides Pf6N2E2_954 and Pf6N2E2_955 are separated by 17 nucleotides
Pf6N2E2_952 - putative exported protein, at 1,123,701 to 1,125,215
_952
Pf6N2E2_953 - FIG00958851: hypothetical protein, at 1,125,205 to 1,125,888
_953
Pf6N2E2_954 - Possible exported protein, at 1,126,014 to 1,126,634
_954
Pf6N2E2_955 - FIG00953508: hypothetical protein, at 1,126,652 to 1,127,065
_955
Position (kb) 1125
1126 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1124.363 kb on - strand, within Pf6N2E2_952 at 1124.456 kb on - strand, within Pf6N2E2_952 at 1125.081 kb on + strand at 1125.125 kb on + strand at 1125.125 kb on + strand at 1125.126 kb on - strand at 1125.126 kb on - strand at 1125.159 kb on + strand at 1125.248 kb on - strand at 1125.530 kb on - strand, within Pf6N2E2_953 at 1125.613 kb on - strand, within Pf6N2E2_953 at 1125.800 kb on + strand, within Pf6N2E2_953 at 1125.801 kb on - strand, within Pf6N2E2_953 at 1125.925 kb on + strand at 1126.003 kb on - strand at 1126.165 kb on + strand, within Pf6N2E2_954 at 1126.166 kb on - strand, within Pf6N2E2_954 at 1126.168 kb on + strand, within Pf6N2E2_954 at 1126.169 kb on - strand, within Pf6N2E2_954 at 1126.169 kb on - strand, within Pf6N2E2_954 at 1126.169 kb on - strand, within Pf6N2E2_954 at 1126.321 kb on + strand, within Pf6N2E2_954 at 1126.375 kb on + strand, within Pf6N2E2_954 at 1126.375 kb on + strand, within Pf6N2E2_954 at 1126.376 kb on - strand, within Pf6N2E2_954 at 1126.376 kb on - strand, within Pf6N2E2_954 at 1126.376 kb on - strand, within Pf6N2E2_954 at 1126.438 kb on + strand, within Pf6N2E2_954 at 1126.438 kb on + strand, within Pf6N2E2_954 at 1126.439 kb on - strand, within Pf6N2E2_954 at 1126.439 kb on - strand, within Pf6N2E2_954 at 1126.439 kb on - strand, within Pf6N2E2_954 at 1126.439 kb on - strand, within Pf6N2E2_954 at 1126.453 kb on + strand, within Pf6N2E2_954 at 1126.454 kb on - strand, within Pf6N2E2_954 at 1126.454 kb on - strand, within Pf6N2E2_954 at 1126.454 kb on - strand, within Pf6N2E2_954 at 1126.454 kb on - strand, within Pf6N2E2_954 at 1126.472 kb on + strand, within Pf6N2E2_954 at 1126.515 kb on + strand, within Pf6N2E2_954 at 1126.515 kb on + strand, within Pf6N2E2_954 at 1126.515 kb on + strand, within Pf6N2E2_954 at 1126.515 kb on + strand, within Pf6N2E2_954 at 1126.576 kb on - strand at 1126.841 kb on + strand, within Pf6N2E2_955 at 1126.841 kb on + strand, within Pf6N2E2_955 at 1126.842 kb on - strand, within Pf6N2E2_955 at 1126.842 kb on - strand, within Pf6N2E2_955
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 0.00078125 M remove 1,124,363 - Pf6N2E2_952 0.44 +0.2 1,124,456 - Pf6N2E2_952 0.50 +1.0 1,125,081 + -0.3 1,125,125 + +0.3 1,125,125 + -1.9 1,125,126 - +0.6 1,125,126 - -0.0 1,125,159 + +0.4 1,125,248 - +2.1 1,125,530 - Pf6N2E2_953 0.48 +2.9 1,125,613 - Pf6N2E2_953 0.60 -1.4 1,125,800 + Pf6N2E2_953 0.87 +1.4 1,125,801 - Pf6N2E2_953 0.87 +1.9 1,125,925 + +1.2 1,126,003 - -1.7 1,126,165 + Pf6N2E2_954 0.24 -0.5 1,126,166 - Pf6N2E2_954 0.24 +1.8 1,126,168 + Pf6N2E2_954 0.25 +0.1 1,126,169 - Pf6N2E2_954 0.25 +1.3 1,126,169 - Pf6N2E2_954 0.25 +0.1 1,126,169 - Pf6N2E2_954 0.25 -0.9 1,126,321 + Pf6N2E2_954 0.49 +0.4 1,126,375 + Pf6N2E2_954 0.58 +0.4 1,126,375 + Pf6N2E2_954 0.58 -0.9 1,126,376 - Pf6N2E2_954 0.58 +1.2 1,126,376 - Pf6N2E2_954 0.58 +0.5 1,126,376 - Pf6N2E2_954 0.58 -1.5 1,126,438 + Pf6N2E2_954 0.68 -0.8 1,126,438 + Pf6N2E2_954 0.68 +1.2 1,126,439 - Pf6N2E2_954 0.68 -0.0 1,126,439 - Pf6N2E2_954 0.68 +0.8 1,126,439 - Pf6N2E2_954 0.68 -0.0 1,126,439 - Pf6N2E2_954 0.68 -0.0 1,126,453 + Pf6N2E2_954 0.71 +1.2 1,126,454 - Pf6N2E2_954 0.71 -1.8 1,126,454 - Pf6N2E2_954 0.71 +0.5 1,126,454 - Pf6N2E2_954 0.71 -0.2 1,126,454 - Pf6N2E2_954 0.71 +0.1 1,126,472 + Pf6N2E2_954 0.74 +0.0 1,126,515 + Pf6N2E2_954 0.81 +0.1 1,126,515 + Pf6N2E2_954 0.81 +2.5 1,126,515 + Pf6N2E2_954 0.81 -0.3 1,126,515 + Pf6N2E2_954 0.81 -0.3 1,126,576 - +0.2 1,126,841 + Pf6N2E2_955 0.46 +0.1 1,126,841 + Pf6N2E2_955 0.46 +0.5 1,126,842 - Pf6N2E2_955 0.46 -0.5 1,126,842 - Pf6N2E2_955 0.46 -0.1
Or see this region's nucleotide sequence