Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_89
Experiment: Manganese (II) chloride tetrahydrate 0.00078125 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Manganese (II) chloride tetrahydrate 0.00078125 M |
---|---|---|---|---|---|
remove | |||||
132,912 | + | -0.5 | |||
132,921 | - | +1.6 | |||
132,921 | - | +0.3 | |||
132,921 | - | +0.3 | |||
132,999 | + | -0.6 | |||
132,999 | + | -0.5 | |||
133,037 | + | -0.2 | |||
133,037 | + | +1.0 | |||
133,038 | - | -0.1 | |||
133,096 | + | +0.1 | |||
133,096 | + | -2.0 | |||
133,146 | + | -1.4 | |||
133,146 | + | +0.8 | |||
133,146 | + | -0.8 | |||
133,146 | + | +1.6 | |||
133,146 | + | +0.0 | |||
133,146 | + | -1.0 | |||
133,146 | + | +0.7 | |||
133,146 | + | -0.5 | |||
133,146 | + | -0.6 | |||
133,146 | + | -0.4 | |||
133,146 | + | +0.4 | |||
133,147 | - | -1.2 | |||
133,147 | - | -2.1 | |||
133,147 | - | +1.0 | |||
133,147 | - | +2.1 | |||
133,147 | - | +0.5 | |||
133,147 | - | +0.2 | |||
133,147 | - | -2.0 | |||
133,198 | + | -0.5 | |||
133,285 | + | +1.4 | |||
133,303 | + | +0.2 | |||
133,304 | - | +0.3 | |||
133,307 | + | +0.6 | |||
133,372 | + | -1.2 | |||
133,415 | + | -0.4 | |||
133,452 | - | +0.8 | |||
133,459 | + | +0.6 | |||
133,460 | - | -0.4 | |||
133,491 | - | +0.5 | |||
133,558 | + | -1.3 | |||
133,558 | + | +0.1 | |||
133,603 | - | +0.6 | |||
133,660 | - | -0.2 | |||
133,672 | - | -0.9 | |||
133,678 | - | -0.1 | |||
133,720 | - | +0.1 | |||
133,842 | + | -0.5 | |||
133,842 | + | -1.8 | |||
133,843 | - | -0.6 | |||
133,850 | + | -0.2 | |||
133,850 | + | -0.4 | |||
133,851 | - | -1.8 | |||
133,851 | - | -0.2 | |||
133,851 | - | +0.5 | |||
133,853 | + | +0.4 | |||
133,853 | + | +1.3 | |||
133,853 | + | -1.3 | |||
133,853 | + | +1.0 | |||
133,854 | - | +0.6 | |||
133,854 | - | +0.4 | |||
133,854 | - | +1.3 | |||
133,854 | - | +0.7 | |||
133,911 | + | Pf6N2E2_89 | 0.40 | -1.3 | |
133,948 | + | Pf6N2E2_89 | 0.63 | -1.4 | |
133,949 | - | Pf6N2E2_89 | 0.64 | -0.7 | |
134,009 | + | -0.8 | |||
134,023 | + | -0.7 | |||
134,023 | + | -1.3 | |||
134,023 | + | -0.0 | |||
134,024 | - | +0.4 | |||
134,129 | + | +0.0 | |||
134,156 | + | +0.3 | |||
134,273 | - | +0.2 | |||
134,292 | + | -0.4 | |||
134,292 | + | -1.8 | |||
134,293 | - | -1.1 | |||
134,353 | - | +1.0 | |||
134,439 | - | -0.4 | |||
134,480 | + | +0.8 | |||
134,481 | - | +1.1 | |||
134,481 | - | +0.2 | |||
134,482 | + | -0.6 | |||
134,482 | + | +1.0 | |||
134,583 | + | +0.6 | |||
134,583 | + | -1.0 | |||
134,583 | + | -0.9 | |||
134,584 | - | -0.3 | |||
134,587 | + | +0.0 | |||
134,587 | + | +0.0 | |||
134,588 | - | +0.4 | |||
134,588 | - | +0.4 | |||
134,620 | - | -0.3 | |||
134,679 | + | -0.3 | |||
134,679 | + | +0.0 | |||
134,680 | - | +3.0 | |||
134,680 | - | -1.2 | |||
134,695 | - | -0.4 | |||
134,727 | + | +0.2 | |||
134,775 | + | +0.8 | |||
134,775 | + | -1.7 | |||
134,775 | + | +0.5 | |||
134,776 | - | -0.2 | |||
134,776 | - | +1.6 | |||
134,776 | - | +0.3 | |||
134,908 | + | +2.2 | |||
134,908 | + | -0.8 | |||
134,957 | - | -1.0 |
Or see this region's nucleotide sequence