Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2407

Experiment: Manganese (II) chloride tetrahydrate 0.00078125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Manganese (II) chloride tetrahydrate 0.00078125 M
2,856,845	+				+0.4
2,857,046	+		Pf6N2E2_2406	0.18	+0.8
2,857,047	-		Pf6N2E2_2406	0.18	+1.2
2,857,109	+		Pf6N2E2_2406	0.26	-0.1
2,857,109	+		Pf6N2E2_2406	0.26	+0.2
2,857,109	+		Pf6N2E2_2406	0.26	+1.7
2,857,109	+		Pf6N2E2_2406	0.26	-2.5
2,857,110	-		Pf6N2E2_2406	0.26	+0.8
2,857,110	-		Pf6N2E2_2406	0.26	-0.3
2,857,110	-		Pf6N2E2_2406	0.26	-0.2
2,857,110	-		Pf6N2E2_2406	0.26	-0.1
2,857,122	-		Pf6N2E2_2406	0.28	+1.9
2,857,190	+		Pf6N2E2_2406	0.36	-1.0
2,857,190	+		Pf6N2E2_2406	0.36	+0.5
2,857,190	+		Pf6N2E2_2406	0.36	+0.3
2,857,191	-		Pf6N2E2_2406	0.36	-0.4
2,857,191	-		Pf6N2E2_2406	0.36	+0.2
2,857,191	-		Pf6N2E2_2406	0.36	+0.3
2,857,208	+		Pf6N2E2_2406	0.38	+0.2
2,857,208	+		Pf6N2E2_2406	0.38	+0.2
2,857,208	+		Pf6N2E2_2406	0.38	-1.9
2,857,209	-		Pf6N2E2_2406	0.39	-1.2
2,857,209	-		Pf6N2E2_2406	0.39	-1.0
2,857,209	-		Pf6N2E2_2406	0.39	+1.0
2,857,209	-		Pf6N2E2_2406	0.39	+0.4
2,857,257	-		Pf6N2E2_2406	0.45	+0.3
2,857,257	-		Pf6N2E2_2406	0.45	+1.5
2,857,576	-		Pf6N2E2_2406	0.85	+0.7
2,857,576	-		Pf6N2E2_2406	0.85	+0.8
2,857,577	+		Pf6N2E2_2406	0.85	-1.0
2,857,578	-		Pf6N2E2_2406	0.85	-0.1
2,857,578	-		Pf6N2E2_2406	0.85	+1.0
2,857,578	-		Pf6N2E2_2406	0.85	-0.1
2,857,578	-		Pf6N2E2_2406	0.85	-0.9
2,857,578	-		Pf6N2E2_2406	0.85	+0.2
2,857,729	+				+0.0
2,857,730	-				-0.8
2,857,742	-				-0.4
2,857,759	+				+0.3
2,857,760	-				-0.2
2,857,781	+				-0.0
2,857,782	-				-0.4
2,857,782	-				-1.1
2,857,782	-				+0.4
2,857,782	-				-0.8
2,857,786	+				+0.1
2,857,786	+				+0.6
2,857,786	+				+0.3
2,857,786	+				-0.2
2,857,787	-				+0.0
2,857,797	+				+0.4
2,857,939	+		Pf6N2E2_2407	0.23	-1.1
2,857,939	+		Pf6N2E2_2407	0.23	-1.0
2,857,940	-		Pf6N2E2_2407	0.23	+1.2
2,857,940	-		Pf6N2E2_2407	0.23	-0.6
2,857,940	-		Pf6N2E2_2407	0.23	+1.6
2,857,942	-		Pf6N2E2_2407	0.23	-0.7
2,857,942	-		Pf6N2E2_2407	0.23	-2.4
2,857,989	+		Pf6N2E2_2407	0.31	+0.2
2,857,990	-		Pf6N2E2_2407	0.31	+0.1
2,857,990	-		Pf6N2E2_2407	0.31	-1.2
2,857,990	-		Pf6N2E2_2407	0.31	+1.5
2,857,994	-		Pf6N2E2_2407	0.32	+1.8
2,857,994	-		Pf6N2E2_2407	0.32	+1.2
2,858,049	+		Pf6N2E2_2407	0.40	+0.4
2,858,050	-		Pf6N2E2_2407	0.41	+0.5
2,858,050	-		Pf6N2E2_2407	0.41	+1.3
2,858,435	-				-0.5
2,858,495	+				-1.0
2,858,656	+				+0.9
2,858,656	+				+0.2
2,858,657	-				-0.8
2,858,696	+				+0.6
2,858,696	+				-0.2
2,858,697	-				+0.8
2,858,697	-				+1.0
2,858,711	+				+1.0
2,858,711	+				+1.0
2,858,711	+				-0.0
2,858,812	-		Pf6N2E2_2408	0.12	+0.3
2,859,174	-		Pf6N2E2_2408	0.32	+0.5
2,859,273	-		Pf6N2E2_2408	0.37	+0.2
2,859,413	+		Pf6N2E2_2408	0.45	+0.5
2,859,414	-		Pf6N2E2_2408	0.45	-0.5
2,859,414	-		Pf6N2E2_2408	0.45	-0.2
2,859,414	-		Pf6N2E2_2408	0.45	-0.3
2,859,414	-		Pf6N2E2_2408	0.45	+0.3
2,859,414	-		Pf6N2E2_2408	0.45	+0.6
2,859,417	+		Pf6N2E2_2408	0.45	+0.1
2,859,417	+		Pf6N2E2_2408	0.45	-0.8
2,859,417	+		Pf6N2E2_2408	0.45	+0.0
2,859,417	+		Pf6N2E2_2408	0.45	-0.3
2,859,417	+		Pf6N2E2_2408	0.45	-0.2
2,859,417	+		Pf6N2E2_2408	0.45	-0.0
2,859,417	+		Pf6N2E2_2408	0.45	+0.8
2,859,417	+		Pf6N2E2_2408	0.45	-0.4
2,859,418	-		Pf6N2E2_2408	0.45	-0.2
2,859,418	-		Pf6N2E2_2408	0.45	+1.9
2,859,418	-		Pf6N2E2_2408	0.45	-0.6
2,859,418	-		Pf6N2E2_2408	0.45	-0.4
2,859,418	-		Pf6N2E2_2408	0.45	+0.4
2,859,418	-		Pf6N2E2_2408	0.45	-0.4