Experiment: anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0955 and Dsui_0956 are separated by 108 nucleotides Dsui_0956 and Dsui_0957 are separated by 132 nucleotides
Dsui_0955: Dsui_0955 - nitrogenase iron protein, at 980,747 to 981,622
_0955
Dsui_0956: Dsui_0956 - nitrogenase molybdenum-iron protein alpha chain, at 981,731 to 983,173
_0956
Dsui_0957: Dsui_0957 - nitrogenase molybdenum-iron protein beta chain, at 983,306 to 984,826
_0957
Position (kb) 981
982
983
984 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 980.838 kb on - strand at 980.917 kb on - strand, within Dsui_0955 at 981.100 kb on - strand at 981.249 kb on - strand, within Dsui_0955 at 981.249 kb on - strand, within Dsui_0955 at 981.303 kb on - strand at 981.368 kb on - strand, within Dsui_0955 at 981.455 kb on - strand, within Dsui_0955 at 981.466 kb on + strand, within Dsui_0955 at 981.496 kb on - strand, within Dsui_0955 at 981.501 kb on - strand at 981.604 kb on + strand at 981.735 kb on + strand at 981.774 kb on + strand at 981.782 kb on - strand at 981.836 kb on - strand at 981.836 kb on - strand at 981.879 kb on - strand, within Dsui_0956 at 981.965 kb on + strand, within Dsui_0956 at 982.216 kb on + strand, within Dsui_0956 at 982.351 kb on + strand, within Dsui_0956 at 982.599 kb on + strand, within Dsui_0956 at 982.613 kb on + strand, within Dsui_0956 at 982.623 kb on + strand, within Dsui_0956 at 982.896 kb on + strand, within Dsui_0956 at 982.904 kb on - strand, within Dsui_0956 at 983.099 kb on + strand at 983.159 kb on + strand at 983.177 kb on - strand at 983.205 kb on + strand at 983.231 kb on + strand at 983.239 kb on - strand at 983.273 kb on - strand at 983.530 kb on + strand, within Dsui_0957 at 983.555 kb on + strand, within Dsui_0957 at 983.574 kb on + strand, within Dsui_0957 at 983.596 kb on + strand, within Dsui_0957 at 983.740 kb on - strand, within Dsui_0957 at 983.815 kb on - strand, within Dsui_0957 at 983.846 kb on + strand, within Dsui_0957 at 983.902 kb on + strand, within Dsui_0957 at 984.026 kb on + strand, within Dsui_0957 at 984.044 kb on - strand, within Dsui_0957
Per-strain Table
Position Strand Gene LocusTag Fraction anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate remove 980,838 - +1.0 980,917 - Dsui_0955 0.19 -1.0 981,100 - -2.0 981,249 - Dsui_0955 0.57 -1.6 981,249 - Dsui_0955 0.57 -0.0 981,303 - -2.3 981,368 - Dsui_0955 0.71 -0.0 981,455 - Dsui_0955 0.81 -2.5 981,466 + Dsui_0955 0.82 -2.0 981,496 - Dsui_0955 0.86 -2.3 981,501 - -0.0 981,604 + -1.6 981,735 + -0.0 981,774 + -2.6 981,782 - -1.6 981,836 - -0.0 981,836 - -2.0 981,879 - Dsui_0956 0.10 -2.4 981,965 + Dsui_0956 0.16 -2.9 982,216 + Dsui_0956 0.34 -0.0 982,351 + Dsui_0956 0.43 -0.0 982,599 + Dsui_0956 0.60 -0.0 982,613 + Dsui_0956 0.61 -1.3 982,623 + Dsui_0956 0.62 -1.8 982,896 + Dsui_0956 0.81 -2.8 982,904 - Dsui_0956 0.81 -0.0 983,099 + -0.0 983,159 + -0.0 983,177 - -2.7 983,205 + -0.6 983,231 + -0.0 983,239 - -0.4 983,273 - -1.0 983,530 + Dsui_0957 0.15 -2.8 983,555 + Dsui_0957 0.16 -1.0 983,574 + Dsui_0957 0.18 -1.6 983,596 + Dsui_0957 0.19 -0.0 983,740 - Dsui_0957 0.29 -0.0 983,815 - Dsui_0957 0.33 -1.6 983,846 + Dsui_0957 0.36 -2.3 983,902 + Dsui_0957 0.39 -1.0 984,026 + Dsui_0957 0.47 -2.0 984,044 - Dsui_0957 0.49 +2.3
Or see this region's nucleotide sequence