Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03575

Experiment: PYE 4C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 4C
3,729,432	+		CCNA_03574	0.70	-1.6
3,729,532	+		CCNA_03574	0.75	-0.5
3,729,532	+		CCNA_03574	0.75	-3.5
3,729,534	+		CCNA_03574	0.75	+1.1
3,729,540	-		CCNA_03574	0.75	-0.2
3,729,568	+		CCNA_03574	0.76	+0.8
3,729,577	-		CCNA_03574	0.76	-0.0
3,729,579	+		CCNA_03574	0.77	+0.0
3,729,579	+		CCNA_03574	0.77	-1.6
3,729,608	+		CCNA_03574	0.78	+0.7
3,729,615	-		CCNA_03574	0.78	-0.7
3,729,617	+		CCNA_03574	0.78	+0.2
3,729,640	-		CCNA_03574	0.79	-0.4
3,729,658	-		CCNA_03574	0.80	+0.1
3,729,658	-		CCNA_03574	0.80	-0.7
3,729,663	-		CCNA_03574	0.80	-0.8
3,729,669	+		CCNA_03574	0.80	-1.0
3,729,681	+		CCNA_03574	0.81	+0.2
3,729,688	+		CCNA_03574	0.81	+0.2
3,729,699	+		CCNA_03574	0.82	+0.8
3,729,761	+		CCNA_03574	0.84	+0.6
3,729,803	+		CCNA_03574	0.86	+1.0
3,729,811	-		CCNA_03574	0.86	-0.5
3,729,840	+		CCNA_03574	0.87	-0.1
3,729,853	-		CCNA_03574	0.88	-1.3
3,729,866	-		CCNA_03574	0.88	+0.4
3,729,866	-		CCNA_03574	0.88	+0.6
3,729,959	-				+0.3
3,729,963	+				+0.8
3,729,963	+				-0.2
3,729,963	+				-2.2
3,729,971	-				-1.2
3,729,971	-				-0.3
3,729,971	-				+1.2
3,730,095	+				-0.8
3,730,125	+				-0.5
3,730,202	+				+0.8
3,730,208	-				+0.5
3,730,300	-				+1.2
3,730,313	+				-2.4
3,730,356	+				-1.7
3,730,356	+				+0.0
3,730,356	+				+1.8
3,730,356	+				-0.5
3,730,357	+				+0.5
3,730,364	-				-1.2
3,730,364	-				+0.0
3,730,364	-				-1.3
3,730,364	-				-1.2
3,730,364	-				+0.6
3,730,365	-				-0.2
3,730,365	-				-0.1
3,730,444	+				+0.4
3,730,449	+				+1.1
3,730,457	-				-0.2
3,730,457	-				-0.2
3,730,512	+				-0.4
3,730,527	-		CCNA_03575	0.10	+0.4
3,730,552	-		CCNA_03575	0.12	+0.3
3,730,564	+		CCNA_03575	0.13	-0.3
3,730,564	+		CCNA_03575	0.13	+0.2
3,730,569	+		CCNA_03575	0.14	+0.6
3,730,572	-		CCNA_03575	0.14	-0.4
3,730,572	-		CCNA_03575	0.14	+0.0
3,730,572	-		CCNA_03575	0.14	+0.1
3,730,572	-		CCNA_03575	0.14	-0.9
3,730,572	-		CCNA_03575	0.14	-0.3
3,730,572	-		CCNA_03575	0.14	-0.2
3,730,572	-		CCNA_03575	0.14	-0.9
3,730,572	-		CCNA_03575	0.14	-0.1
3,730,572	-		CCNA_03575	0.14	+0.5
3,730,578	-		CCNA_03575	0.14	+0.4
3,730,588	-		CCNA_03575	0.15	-0.9
3,730,592	+		CCNA_03575	0.15	+2.8
3,730,605	-		CCNA_03575	0.17	-0.8
3,730,654	+		CCNA_03575	0.21	+0.2
3,730,654	+		CCNA_03575	0.21	+0.6
3,730,661	+		CCNA_03575	0.21	+0.8
3,730,687	-		CCNA_03575	0.23	-1.2
3,730,709	+		CCNA_03575	0.25	-1.5
3,730,730	+		CCNA_03575	0.27	-0.5
3,730,789	+		CCNA_03575	0.32	+0.5
3,730,828	-		CCNA_03575	0.35	+0.0
3,730,863	-		CCNA_03575	0.38	+3.4
3,730,921	+		CCNA_03575	0.43	+0.7
3,730,924	-		CCNA_03575	0.43	-1.7
3,730,968	+		CCNA_03575	0.47	-0.5
3,730,976	-		CCNA_03575	0.48	-0.8
3,730,976	-		CCNA_03575	0.48	-0.7
3,731,016	+		CCNA_03575	0.51	-1.7
3,731,032	+		CCNA_03575	0.53	+1.1
3,731,042	-		CCNA_03575	0.53	+1.6
3,731,095	+		CCNA_03575	0.58	-0.4
3,731,103	-		CCNA_03575	0.59	-1.3
3,731,106	+		CCNA_03575	0.59	-0.2
3,731,106	+		CCNA_03575	0.59	-1.6
3,731,121	+		CCNA_03575	0.60	-0.3
3,731,125	-		CCNA_03575	0.60	+0.9
3,731,267	+		CCNA_03575	0.72	+1.1
3,731,272	+		CCNA_03575	0.73	+0.5
3,731,293	+		CCNA_03575	0.74	+1.8
3,731,321	-		CCNA_03575	0.77	+0.6
3,731,334	+		CCNA_03575	0.78	-0.7
3,731,335	-		CCNA_03575	0.78	-0.8
3,731,359	-		CCNA_03575	0.80	+0.0
3,731,361	+		CCNA_03575	0.80	+0.7
3,731,361	+		CCNA_03575	0.80	+2.0
3,731,369	-		CCNA_03575	0.81	-1.3
3,731,376	-		CCNA_03575	0.81	+0.5
3,731,382	+		CCNA_03575	0.82	+0.6
3,731,386	+		CCNA_03575	0.82	+0.3
3,731,386	+		CCNA_03575	0.82	+1.4
3,731,391	-		CCNA_03575	0.83	-0.8
3,731,391	-		CCNA_03575	0.83	-3.8
3,731,396	-		CCNA_03575	0.83	-1.3
3,731,415	-		CCNA_03575	0.85	+0.9
3,731,427	-		CCNA_03575	0.86	-1.2
3,731,427	-		CCNA_03575	0.86	+0.1
3,731,430	+		CCNA_03575	0.86	+0.1
3,731,454	+		CCNA_03575	0.88	+0.3
3,731,485	-				-0.2
3,731,496	+				-0.2
3,731,517	+				+0.8
3,731,517	-				-0.1
3,731,530	-				+0.5
3,731,530	-				+0.3
3,731,547	+				+0.3
3,731,555	-				+0.1
3,731,570	+				+0.7
3,731,570	+				+0.5
3,731,578	-				+0.3
3,731,605	+				-0.2
3,731,613	-				-2.2
3,731,613	-				+3.8
3,731,633	-				-1.3
3,731,635	+				-0.1
3,731,655	+				+1.4
3,731,655	+				+1.2
3,731,655	+				-0.1
3,731,655	+				+0.3
3,731,655	+				+0.9
3,731,663	-				-0.7
3,731,663	-				+0.3
3,731,663	-				+0.1
3,731,663	-				+0.6
3,731,668	+				-0.3
3,731,701	+		CCNA_03576	0.19	+0.4
3,731,729	-		CCNA_03576	0.29	-1.0
3,731,792	+		CCNA_03576	0.51	+0.3
3,731,802	+		CCNA_03576	0.55	+0.1
3,731,802	+		CCNA_03576	0.55	-0.7
3,731,810	-		CCNA_03576	0.57	+0.1
3,731,810	-		CCNA_03576	0.57	-0.2
3,731,833	+		CCNA_03576	0.66	-0.5
3,731,841	-		CCNA_03576	0.68	+0.9
3,731,844	+		CCNA_03576	0.70	+0.3
3,731,855	-		CCNA_03576	0.73	+0.5
3,731,880	+		CCNA_03576	0.82	+1.0
3,731,880	+		CCNA_03576	0.82	+0.1
3,731,888	-		CCNA_03576	0.85	+1.7
3,731,888	-		CCNA_03576	0.85	+0.6
3,731,888	-		CCNA_03576	0.85	+0.4
3,731,888	-		CCNA_03576	0.85	+0.5
3,731,931	-				+0.5
3,731,931	-				+0.5
3,731,931	-				+0.3
3,731,931	-				-0.6
3,731,931	-				+0.0
3,731,931	-				+4.2
3,732,095	-				-3.1
3,732,095	-				-1.1
3,732,122	-				-2.2
3,732,229	-				-1.3
3,732,353	+		CCNA_03577	0.12	+0.3
3,732,371	+		CCNA_03577	0.13	-3.0
3,732,371	+		CCNA_03577	0.13	-2.4
3,732,371	+		CCNA_03577	0.13	-1.9
3,732,379	-		CCNA_03577	0.13	-3.2
3,732,382	+				-0.7
3,732,382	+		CCNA_03577	0.13	-2.1
3,732,410	-		CCNA_03577	0.14	-3.5
3,732,459	-		CCNA_03577	0.16	-3.3