Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27495 and BWI76_RS27500 are separated by 165 nucleotides BWI76_RS27500 and BWI76_RS27505 are separated by 150 nucleotides BWI76_RS27505 and BWI76_RS27510 are separated by 448 nucleotides
BWI76_RS27495: BWI76_RS27495 - CDP-diacylglycerol diphosphatase, at 5,704,687 to 5,705,448
_RS27495
BWI76_RS27500: BWI76_RS27500 - sulfate transporter subunit, at 5,705,614 to 5,706,603
_RS27500
BWI76_RS27505: BWI76_RS27505 - septal ring assembly protein ZapB, at 5,706,754 to 5,706,993
_RS27505
BWI76_RS27510: BWI76_RS27510 - aquaporin, at 5,707,442 to 5,708,293
_RS27510
Position (kb) 5705
5706
5707 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5704.616 kb on + strand at 5704.620 kb on + strand at 5704.620 kb on + strand at 5704.620 kb on + strand at 5704.628 kb on - strand at 5704.628 kb on - strand at 5704.631 kb on + strand at 5704.633 kb on - strand at 5704.648 kb on + strand at 5704.648 kb on + strand at 5704.656 kb on - strand at 5704.656 kb on - strand at 5704.685 kb on + strand at 5704.696 kb on + strand at 5704.706 kb on + strand at 5704.711 kb on + strand at 5704.714 kb on - strand at 5704.725 kb on - strand at 5704.725 kb on - strand at 5704.725 kb on - strand at 5704.739 kb on - strand at 5704.747 kb on - strand at 5704.758 kb on + strand at 5704.758 kb on + strand at 5704.758 kb on + strand at 5704.766 kb on - strand, within BWI76_RS27495 at 5704.766 kb on - strand, within BWI76_RS27495 at 5704.775 kb on + strand, within BWI76_RS27495 at 5704.805 kb on + strand, within BWI76_RS27495 at 5704.813 kb on - strand, within BWI76_RS27495 at 5704.813 kb on - strand, within BWI76_RS27495 at 5704.825 kb on + strand, within BWI76_RS27495 at 5704.825 kb on + strand, within BWI76_RS27495 at 5704.844 kb on + strand, within BWI76_RS27495 at 5704.932 kb on + strand, within BWI76_RS27495 at 5704.979 kb on + strand, within BWI76_RS27495 at 5704.979 kb on + strand, within BWI76_RS27495 at 5704.984 kb on + strand, within BWI76_RS27495 at 5705.054 kb on - strand, within BWI76_RS27495 at 5705.069 kb on + strand, within BWI76_RS27495 at 5705.132 kb on + strand, within BWI76_RS27495 at 5705.248 kb on + strand, within BWI76_RS27495 at 5705.253 kb on + strand, within BWI76_RS27495 at 5705.272 kb on - strand, within BWI76_RS27495 at 5705.620 kb on - strand at 5705.639 kb on - strand at 5705.656 kb on - strand at 5705.699 kb on + strand at 5705.755 kb on - strand, within BWI76_RS27500 at 5705.771 kb on - strand, within BWI76_RS27500 at 5705.788 kb on + strand, within BWI76_RS27500 at 5705.812 kb on - strand, within BWI76_RS27500 at 5706.053 kb on + strand, within BWI76_RS27500 at 5706.122 kb on - strand, within BWI76_RS27500 at 5706.273 kb on - strand, within BWI76_RS27500 at 5706.354 kb on + strand, within BWI76_RS27500 at 5706.354 kb on + strand, within BWI76_RS27500 at 5706.361 kb on + strand, within BWI76_RS27500 at 5706.362 kb on - strand, within BWI76_RS27500 at 5706.584 kb on - strand at 5706.585 kb on - strand at 5706.585 kb on - strand at 5706.603 kb on + strand at 5706.624 kb on + strand at 5706.635 kb on + strand at 5706.712 kb on + strand at 5706.717 kb on + strand at 5706.772 kb on + strand at 5706.780 kb on - strand, within BWI76_RS27505 at 5706.810 kb on - strand, within BWI76_RS27505 at 5706.866 kb on - strand, within BWI76_RS27505 at 5706.930 kb on - strand, within BWI76_RS27505 at 5706.989 kb on - strand at 5706.994 kb on + strand at 5706.994 kb on + strand at 5707.012 kb on - strand at 5707.087 kb on - strand at 5707.092 kb on - strand at 5707.534 kb on + strand, within BWI76_RS27510
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 5,704,616 + -0.5 5,704,620 + -0.8 5,704,620 + -0.4 5,704,620 + -1.4 5,704,628 - +0.6 5,704,628 - -0.6 5,704,631 + -0.9 5,704,633 - -0.2 5,704,648 + +0.8 5,704,648 + -0.9 5,704,656 - +0.4 5,704,656 - +0.8 5,704,685 + -0.8 5,704,696 + -0.6 5,704,706 + -0.6 5,704,711 + -1.6 5,704,714 - -0.4 5,704,725 - -0.9 5,704,725 - -0.0 5,704,725 - +0.4 5,704,739 - -1.9 5,704,747 - -0.9 5,704,758 + -0.5 5,704,758 + -0.2 5,704,758 + -0.1 5,704,766 - BWI76_RS27495 0.10 +0.1 5,704,766 - BWI76_RS27495 0.10 -0.8 5,704,775 + BWI76_RS27495 0.12 +2.9 5,704,805 + BWI76_RS27495 0.15 -0.3 5,704,813 - BWI76_RS27495 0.17 -0.2 5,704,813 - BWI76_RS27495 0.17 -1.3 5,704,825 + BWI76_RS27495 0.18 -1.2 5,704,825 + BWI76_RS27495 0.18 +0.4 5,704,844 + BWI76_RS27495 0.21 -0.5 5,704,932 + BWI76_RS27495 0.32 -0.8 5,704,979 + BWI76_RS27495 0.38 -0.4 5,704,979 + BWI76_RS27495 0.38 -0.1 5,704,984 + BWI76_RS27495 0.39 +0.2 5,705,054 - BWI76_RS27495 0.48 -2.0 5,705,069 + BWI76_RS27495 0.50 -0.2 5,705,132 + BWI76_RS27495 0.58 +0.3 5,705,248 + BWI76_RS27495 0.74 -0.9 5,705,253 + BWI76_RS27495 0.74 +1.0 5,705,272 - BWI76_RS27495 0.77 +1.4 5,705,620 - -0.1 5,705,639 - -1.1 5,705,656 - -0.4 5,705,699 + -0.3 5,705,755 - BWI76_RS27500 0.14 -0.7 5,705,771 - BWI76_RS27500 0.16 +0.8 5,705,788 + BWI76_RS27500 0.18 -0.6 5,705,812 - BWI76_RS27500 0.20 +0.9 5,706,053 + BWI76_RS27500 0.44 +0.8 5,706,122 - BWI76_RS27500 0.51 -1.1 5,706,273 - BWI76_RS27500 0.67 -0.9 5,706,354 + BWI76_RS27500 0.75 -0.1 5,706,354 + BWI76_RS27500 0.75 -0.3 5,706,361 + BWI76_RS27500 0.75 -0.2 5,706,362 - BWI76_RS27500 0.76 +0.0 5,706,584 - -0.5 5,706,585 - +0.4 5,706,585 - -0.2 5,706,603 + +0.1 5,706,624 + -0.1 5,706,635 + -0.2 5,706,712 + -0.0 5,706,717 + +0.3 5,706,772 + -0.2 5,706,780 - BWI76_RS27505 0.11 -1.9 5,706,810 - BWI76_RS27505 0.23 -0.9 5,706,866 - BWI76_RS27505 0.47 -1.3 5,706,930 - BWI76_RS27505 0.73 -0.4 5,706,989 - +0.8 5,706,994 + -0.3 5,706,994 + -1.5 5,707,012 - -1.0 5,707,087 - -0.6 5,707,092 - +3.6 5,707,534 + BWI76_RS27510 0.11 -0.8
Or see this region's nucleotide sequence