Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26970 and BWI76_RS26975 are separated by 236 nucleotides BWI76_RS26975 and BWI76_RS26980 are separated by 262 nucleotides BWI76_RS26980 and BWI76_RS26985 are separated by 98 nucleotides
BWI76_RS26970: BWI76_RS26970 - aromatic acid/H+ symport family MFS transporter, at 5,594,959 to 5,596,317
_RS26970
BWI76_RS26975: BWI76_RS26975 - transcriptional regulator, at 5,596,554 to 5,596,847
_RS26975
BWI76_RS26980: BWI76_RS26980 - cold-shock protein, at 5,597,110 to 5,597,322
_RS26980
BWI76_RS26985: BWI76_RS26985 - ABC transporter ATP-binding protein, at 5,597,421 to 5,599,040
_RS26985
Position (kb) 5597
5598 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5596.261 kb on + strand at 5596.264 kb on - strand at 5596.353 kb on - strand at 5596.358 kb on + strand at 5596.376 kb on - strand at 5596.403 kb on - strand at 5596.403 kb on - strand at 5596.508 kb on + strand at 5596.508 kb on + strand at 5596.591 kb on + strand, within BWI76_RS26975 at 5596.684 kb on + strand, within BWI76_RS26975 at 5596.692 kb on - strand, within BWI76_RS26975 at 5596.729 kb on + strand, within BWI76_RS26975 at 5596.729 kb on + strand, within BWI76_RS26975 at 5596.729 kb on + strand, within BWI76_RS26975 at 5596.740 kb on - strand, within BWI76_RS26975 at 5596.748 kb on - strand, within BWI76_RS26975 at 5596.748 kb on - strand, within BWI76_RS26975 at 5596.763 kb on + strand, within BWI76_RS26975 at 5596.763 kb on + strand, within BWI76_RS26975 at 5596.771 kb on - strand, within BWI76_RS26975 at 5596.772 kb on - strand, within BWI76_RS26975 at 5596.774 kb on + strand, within BWI76_RS26975 at 5596.782 kb on - strand, within BWI76_RS26975 at 5596.782 kb on - strand, within BWI76_RS26975 at 5596.782 kb on - strand, within BWI76_RS26975 at 5596.784 kb on + strand, within BWI76_RS26975 at 5596.784 kb on + strand, within BWI76_RS26975 at 5596.788 kb on + strand, within BWI76_RS26975 at 5596.802 kb on + strand, within BWI76_RS26975 at 5596.820 kb on + strand at 5596.828 kb on - strand at 5596.953 kb on + strand at 5596.989 kb on - strand at 5597.063 kb on + strand at 5597.063 kb on + strand at 5597.071 kb on - strand at 5597.159 kb on + strand, within BWI76_RS26980 at 5597.208 kb on + strand, within BWI76_RS26980 at 5597.216 kb on - strand, within BWI76_RS26980 at 5597.218 kb on + strand, within BWI76_RS26980 at 5597.218 kb on + strand at 5597.637 kb on + strand, within BWI76_RS26985 at 5597.645 kb on - strand, within BWI76_RS26985 at 5597.649 kb on + strand, within BWI76_RS26985 at 5597.824 kb on - strand at 5598.044 kb on + strand, within BWI76_RS26985
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 5,596,261 + -0.8 5,596,264 - -0.8 5,596,353 - -0.8 5,596,358 + +0.1 5,596,376 - -0.3 5,596,403 - -0.1 5,596,403 - -0.7 5,596,508 + -1.4 5,596,508 + -1.9 5,596,591 + BWI76_RS26975 0.13 -0.9 5,596,684 + BWI76_RS26975 0.44 -0.5 5,596,692 - BWI76_RS26975 0.47 -0.3 5,596,729 + BWI76_RS26975 0.60 -0.9 5,596,729 + BWI76_RS26975 0.60 -1.0 5,596,729 + BWI76_RS26975 0.60 -1.6 5,596,740 - BWI76_RS26975 0.63 +1.0 5,596,748 - BWI76_RS26975 0.66 +0.8 5,596,748 - BWI76_RS26975 0.66 -0.5 5,596,763 + BWI76_RS26975 0.71 +0.3 5,596,763 + BWI76_RS26975 0.71 -0.1 5,596,771 - BWI76_RS26975 0.74 +1.5 5,596,772 - BWI76_RS26975 0.74 -0.6 5,596,774 + BWI76_RS26975 0.75 -1.7 5,596,782 - BWI76_RS26975 0.78 -1.6 5,596,782 - BWI76_RS26975 0.78 +0.0 5,596,782 - BWI76_RS26975 0.78 -0.5 5,596,784 + BWI76_RS26975 0.78 +2.2 5,596,784 + BWI76_RS26975 0.78 -1.5 5,596,788 + BWI76_RS26975 0.80 -0.5 5,596,802 + BWI76_RS26975 0.84 -0.5 5,596,820 + +0.0 5,596,828 - +0.1 5,596,953 + -1.5 5,596,989 - -0.5 5,597,063 + -0.1 5,597,063 + -1.0 5,597,071 - +0.0 5,597,159 + BWI76_RS26980 0.23 -1.8 5,597,208 + BWI76_RS26980 0.46 -1.8 5,597,216 - BWI76_RS26980 0.50 +1.6 5,597,218 + BWI76_RS26980 0.51 +1.6 5,597,218 + +2.0 5,597,637 + BWI76_RS26985 0.13 -1.0 5,597,645 - BWI76_RS26985 0.14 -0.1 5,597,649 + BWI76_RS26985 0.14 +0.5 5,597,824 - +1.6 5,598,044 + BWI76_RS26985 0.38 +0.5
Or see this region's nucleotide sequence