Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23730

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23725 and BWI76_RS23730 are separated by 13 nucleotidesBWI76_RS23730 and BWI76_RS23735 overlap by 4 nucleotides BWI76_RS23725: BWI76_RS23725 - 2-deoxy-D-ribonate transporter 2 (from data), at 4,952,713 to 4,954,050 _RS23725 BWI76_RS23730: BWI76_RS23730 - glycerate kinase, at 4,954,064 to 4,955,239 _RS23730 BWI76_RS23735: BWI76_RS23735 - sugar diacid utilization regulator, at 4,955,236 to 4,956,393 _RS23735 Position (kb) 4954 4955 4956Strain fitness (log2 ratio) -2 -1 0 1at 4953.148 kb on + strand, within BWI76_RS23725at 4953.377 kb on + strand, within BWI76_RS23725at 4953.536 kb on - strand, within BWI76_RS23725at 4953.615 kb on + strand, within BWI76_RS23725at 4953.625 kb on - strand, within BWI76_RS23725at 4953.625 kb on - strand, within BWI76_RS23725at 4953.694 kb on + strand, within BWI76_RS23725at 4953.715 kb on + strand, within BWI76_RS23725at 4953.718 kb on - strand, within BWI76_RS23725at 4953.796 kb on + strand, within BWI76_RS23725at 4953.914 kb on + strand, within BWI76_RS23725at 4953.922 kb on - strandat 4954.401 kb on + strand, within BWI76_RS23730at 4954.409 kb on - strand, within BWI76_RS23730at 4954.420 kb on + strand, within BWI76_RS23730at 4954.568 kb on + strand, within BWI76_RS23730at 4954.568 kb on + strand, within BWI76_RS23730at 4954.669 kb on + strand, within BWI76_RS23730at 4954.677 kb on - strand, within BWI76_RS23730at 4954.677 kb on - strand, within BWI76_RS23730at 4954.839 kb on - strand, within BWI76_RS23730at 4954.900 kb on + strand, within BWI76_RS23730at 4955.375 kb on - strand, within BWI76_RS23735at 4955.987 kb on - strand, within BWI76_RS23735at 4956.149 kb on - strand, within BWI76_RS23735at 4956.233 kb on - strand, within BWI76_RS23735

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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4,953,148 + BWI76_RS23725 0.33 -2.3
4,953,377 + BWI76_RS23725 0.50 -0.3
4,953,536 - BWI76_RS23725 0.62 +1.1
4,953,615 + BWI76_RS23725 0.67 -0.4
4,953,625 - BWI76_RS23725 0.68 -0.2
4,953,625 - BWI76_RS23725 0.68 -0.2
4,953,694 + BWI76_RS23725 0.73 -0.1
4,953,715 + BWI76_RS23725 0.75 -1.6
4,953,718 - BWI76_RS23725 0.75 -0.6
4,953,796 + BWI76_RS23725 0.81 +0.3
4,953,914 + BWI76_RS23725 0.90 -0.6
4,953,922 - +0.4
4,954,401 + BWI76_RS23730 0.29 +0.0
4,954,409 - BWI76_RS23730 0.29 -0.4
4,954,420 + BWI76_RS23730 0.30 -0.5
4,954,568 + BWI76_RS23730 0.43 +1.4
4,954,568 + BWI76_RS23730 0.43 +1.0
4,954,669 + BWI76_RS23730 0.51 +1.1
4,954,677 - BWI76_RS23730 0.52 -0.1
4,954,677 - BWI76_RS23730 0.52 -0.3
4,954,839 - BWI76_RS23730 0.66 -0.2
4,954,900 + BWI76_RS23730 0.71 -0.4
4,955,375 - BWI76_RS23735 0.12 -0.1
4,955,987 - BWI76_RS23735 0.65 +0.9
4,956,149 - BWI76_RS23735 0.79 +0.3
4,956,233 - BWI76_RS23735 0.86 -0.9

Or see this region's nucleotide sequence