Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23450 and BWI76_RS23455 are separated by 96 nucleotides BWI76_RS23455 and BWI76_RS23460 are separated by 110 nucleotides BWI76_RS23460 and BWI76_RS23465 are separated by 116 nucleotides
BWI76_RS23450: BWI76_RS23450 - LysR family transcriptional regulator, at 4,893,121 to 4,893,993
_RS23450
BWI76_RS23455: BWI76_RS23455 - Na(+)-translocating NADH-quinone reductase subunit E, at 4,894,090 to 4,894,578
_RS23455
BWI76_RS23460: BWI76_RS23460 - hypothetical protein, at 4,894,689 to 4,895,918
_RS23460
BWI76_RS23465: BWI76_RS23465 - oxidoreductase, at 4,896,035 to 4,896,907
_RS23465
Position (kb) 4894
4895
4896 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4893.699 kb on + strand, within BWI76_RS23450 at 4893.714 kb on - strand, within BWI76_RS23450 at 4893.725 kb on - strand at 4893.790 kb on + strand, within BWI76_RS23450 at 4893.790 kb on + strand, within BWI76_RS23450 at 4893.791 kb on + strand, within BWI76_RS23450 at 4893.798 kb on - strand, within BWI76_RS23450 at 4893.798 kb on - strand, within BWI76_RS23450 at 4894.081 kb on + strand at 4894.110 kb on + strand at 4894.206 kb on - strand, within BWI76_RS23455 at 4894.442 kb on + strand, within BWI76_RS23455 at 4894.490 kb on + strand, within BWI76_RS23455 at 4894.806 kb on - strand at 4894.989 kb on + strand, within BWI76_RS23460 at 4894.994 kb on + strand, within BWI76_RS23460 at 4895.019 kb on - strand, within BWI76_RS23460 at 4895.136 kb on - strand, within BWI76_RS23460 at 4895.223 kb on + strand, within BWI76_RS23460 at 4895.616 kb on + strand, within BWI76_RS23460 at 4895.825 kb on + strand at 4895.838 kb on + strand at 4895.893 kb on + strand at 4895.946 kb on - strand at 4895.992 kb on + strand at 4895.992 kb on + strand at 4896.000 kb on - strand at 4896.024 kb on - strand at 4896.032 kb on + strand at 4896.260 kb on + strand, within BWI76_RS23465 at 4896.358 kb on + strand, within BWI76_RS23465 at 4896.387 kb on + strand, within BWI76_RS23465 at 4896.401 kb on - strand, within BWI76_RS23465 at 4896.470 kb on + strand, within BWI76_RS23465 at 4896.553 kb on - strand, within BWI76_RS23465 at 4896.684 kb on + strand, within BWI76_RS23465 at 4896.692 kb on - strand, within BWI76_RS23465 at 4896.768 kb on - strand, within BWI76_RS23465 at 4896.807 kb on + strand, within BWI76_RS23465 at 4896.807 kb on + strand, within BWI76_RS23465 at 4896.816 kb on - strand, within BWI76_RS23465 at 4896.869 kb on + strand at 4896.877 kb on - strand at 4896.882 kb on - strand at 4896.889 kb on + strand at 4896.890 kb on + strand at 4896.890 kb on + strand at 4896.890 kb on + strand at 4896.890 kb on + strand at 4896.891 kb on - strand at 4896.896 kb on + strand at 4896.898 kb on - strand at 4896.901 kb on + strand at 4896.914 kb on - strand at 4896.915 kb on - strand at 4896.916 kb on - strand at 4896.916 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 4,893,699 + BWI76_RS23450 0.66 +0.1 4,893,714 - BWI76_RS23450 0.68 +0.7 4,893,725 - +1.1 4,893,790 + BWI76_RS23450 0.77 -0.2 4,893,790 + BWI76_RS23450 0.77 +1.1 4,893,791 + BWI76_RS23450 0.77 -1.4 4,893,798 - BWI76_RS23450 0.78 +0.1 4,893,798 - BWI76_RS23450 0.78 -0.5 4,894,081 + +1.6 4,894,110 + -2.1 4,894,206 - BWI76_RS23455 0.24 +3.4 4,894,442 + BWI76_RS23455 0.72 +1.3 4,894,490 + BWI76_RS23455 0.82 -0.6 4,894,806 - +1.6 4,894,989 + BWI76_RS23460 0.24 +0.0 4,894,994 + BWI76_RS23460 0.25 +0.3 4,895,019 - BWI76_RS23460 0.27 +0.5 4,895,136 - BWI76_RS23460 0.36 -0.2 4,895,223 + BWI76_RS23460 0.43 -1.5 4,895,616 + BWI76_RS23460 0.75 +0.9 4,895,825 + +0.0 4,895,838 + +0.1 4,895,893 + +3.4 4,895,946 - -0.4 4,895,992 + -2.6 4,895,992 + +0.3 4,896,000 - -0.3 4,896,024 - -1.3 4,896,032 + -0.5 4,896,260 + BWI76_RS23465 0.26 +1.0 4,896,358 + BWI76_RS23465 0.37 -0.2 4,896,387 + BWI76_RS23465 0.40 -0.3 4,896,401 - BWI76_RS23465 0.42 -0.6 4,896,470 + BWI76_RS23465 0.50 -1.3 4,896,553 - BWI76_RS23465 0.59 -0.4 4,896,684 + BWI76_RS23465 0.74 +0.7 4,896,692 - BWI76_RS23465 0.75 +0.3 4,896,768 - BWI76_RS23465 0.84 -0.0 4,896,807 + BWI76_RS23465 0.88 -0.7 4,896,807 + BWI76_RS23465 0.88 +0.5 4,896,816 - BWI76_RS23465 0.89 -0.6 4,896,869 + -0.5 4,896,877 - -0.5 4,896,882 - +0.2 4,896,889 + +1.3 4,896,890 + -0.6 4,896,890 + +0.3 4,896,890 + -0.8 4,896,890 + -1.6 4,896,891 - -1.3 4,896,896 + -1.7 4,896,898 - +0.4 4,896,901 + +0.7 4,896,914 - +1.6 4,896,915 - +0.0 4,896,916 - -0.2 4,896,916 - +0.8
Or see this region's nucleotide sequence