Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21130

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21125 and BWI76_RS21130 are separated by 107 nucleotidesBWI76_RS21130 and BWI76_RS21135 are separated by 1 nucleotidesBWI76_RS21135 and BWI76_RS21140 are separated by 1 nucleotides BWI76_RS21125: BWI76_RS21125 - aminopeptidase PepB, at 4,424,912 to 4,426,198 _RS21125 BWI76_RS21130: BWI76_RS21130 - Fe-S assembly protein IscX, at 4,426,306 to 4,426,506 _RS21130 BWI76_RS21135: BWI76_RS21135 - ferredoxin, 2Fe-2S type, ISC system, at 4,426,508 to 4,426,843 _RS21135 BWI76_RS21140: BWI76_RS21140 - molecular chaperone HscA, at 4,426,845 to 4,428,695 _RS21140 Position (kb) 4426 4427Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4425.315 kb on - strand, within BWI76_RS21125at 4425.357 kb on - strand, within BWI76_RS21125at 4425.734 kb on - strand, within BWI76_RS21125at 4425.826 kb on + strand, within BWI76_RS21125at 4425.899 kb on - strand, within BWI76_RS21125at 4425.952 kb on - strand, within BWI76_RS21125at 4426.228 kb on + strandat 4426.228 kb on + strandat 4426.228 kb on + strandat 4426.236 kb on - strandat 4426.236 kb on - strandat 4426.405 kb on - strand, within BWI76_RS21130at 4426.454 kb on + strand, within BWI76_RS21130at 4426.459 kb on + strandat 4426.490 kb on + strandat 4427.115 kb on - strand, within BWI76_RS21140at 4427.205 kb on - strand, within BWI76_RS21140at 4427.207 kb on + strand, within BWI76_RS21140

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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4,425,315 - BWI76_RS21125 0.31 +3.0
4,425,357 - BWI76_RS21125 0.35 +1.5
4,425,734 - BWI76_RS21125 0.64 +0.4
4,425,826 + BWI76_RS21125 0.71 +0.8
4,425,899 - BWI76_RS21125 0.77 +0.0
4,425,952 - BWI76_RS21125 0.81 -0.6
4,426,228 + -1.2
4,426,228 + -0.6
4,426,228 + -0.1
4,426,236 - -2.1
4,426,236 - -1.2
4,426,405 - BWI76_RS21130 0.49 -1.1
4,426,454 + BWI76_RS21130 0.74 -0.8
4,426,459 + +0.4
4,426,490 + -0.2
4,427,115 - BWI76_RS21140 0.15 -0.7
4,427,205 - BWI76_RS21140 0.19 -0.8
4,427,207 + BWI76_RS21140 0.20 -0.8

Or see this region's nucleotide sequence