Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19330

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19325 and BWI76_RS19330 are separated by 298 nucleotidesBWI76_RS19330 and BWI76_RS19335 are separated by 48 nucleotides BWI76_RS19325: BWI76_RS19325 - mandelate racemase, at 4,025,924 to 4,027,078 _RS19325 BWI76_RS19330: BWI76_RS19330 - HAD family hydrolase, at 4,027,377 to 4,028,039 _RS19330 BWI76_RS19335: BWI76_RS19335 - MFS transporter, at 4,028,088 to 4,029,365 _RS19335 Position (kb) 4027 4028 4029Strain fitness (log2 ratio) -2 -1 0 1 2at 4026.801 kb on - strand, within BWI76_RS19325at 4026.864 kb on - strand, within BWI76_RS19325at 4027.948 kb on - strand, within BWI76_RS19330at 4028.218 kb on + strand, within BWI76_RS19335at 4028.603 kb on - strand, within BWI76_RS19335at 4028.637 kb on + strand, within BWI76_RS19335at 4028.643 kb on - strand, within BWI76_RS19335at 4028.698 kb on + strand, within BWI76_RS19335at 4028.698 kb on + strand, within BWI76_RS19335at 4028.698 kb on + strand, within BWI76_RS19335at 4028.706 kb on - strand, within BWI76_RS19335at 4028.706 kb on - strand, within BWI76_RS19335at 4028.706 kb on - strand, within BWI76_RS19335at 4028.878 kb on - strand, within BWI76_RS19335at 4028.900 kb on + strand, within BWI76_RS19335

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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4,026,801 - BWI76_RS19325 0.76 +0.9
4,026,864 - BWI76_RS19325 0.81 -0.3
4,027,948 - BWI76_RS19330 0.86 -0.9
4,028,218 + BWI76_RS19335 0.10 +2.3
4,028,603 - BWI76_RS19335 0.40 -0.6
4,028,637 + BWI76_RS19335 0.43 +0.4
4,028,643 - BWI76_RS19335 0.43 -0.3
4,028,698 + BWI76_RS19335 0.48 -2.2
4,028,698 + BWI76_RS19335 0.48 -0.5
4,028,698 + BWI76_RS19335 0.48 -0.7
4,028,706 - BWI76_RS19335 0.48 +0.5
4,028,706 - BWI76_RS19335 0.48 -1.5
4,028,706 - BWI76_RS19335 0.48 -0.4
4,028,878 - BWI76_RS19335 0.62 -1.4
4,028,900 + BWI76_RS19335 0.64 -2.1

Or see this region's nucleotide sequence