Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17415 and BWI76_RS17420 are separated by 39 nucleotides BWI76_RS17420 and BWI76_RS17425 are separated by 3 nucleotides BWI76_RS17425 and BWI76_RS17430 overlap by 4 nucleotides BWI76_RS17430 and BWI76_RS17435 overlap by 1 nucleotides
BWI76_RS17415: BWI76_RS17415 - 3-deoxy-8-phosphooctulonate synthase, at 3,612,582 to 3,613,436
_RS17415
BWI76_RS17420: BWI76_RS17420 - hypothetical protein, at 3,613,476 to 3,614,288
_RS17420
BWI76_RS17425: BWI76_RS17425 - hypothetical protein, at 3,614,292 to 3,614,684
_RS17425
BWI76_RS17430: BWI76_RS17430 - protein-(glutamine-N5) methyltransferase, release factor-specific, at 3,614,681 to 3,615,520
_RS17430
BWI76_RS17435: BWI76_RS17435 - peptide chain release factor 1, at 3,615,520 to 3,616,602
_RS17435
Position (kb) 3614
3615 Strain fitness (log2 ratio) -2
-1
0
1 at 3613.611 kb on - strand, within BWI76_RS17420 at 3613.979 kb on - strand, within BWI76_RS17420 at 3614.032 kb on - strand, within BWI76_RS17420 at 3614.462 kb on + strand, within BWI76_RS17425 at 3614.470 kb on - strand, within BWI76_RS17425 at 3614.653 kb on + strand at 3614.805 kb on - strand, within BWI76_RS17430
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 3,613,611 - BWI76_RS17420 0.17 -2.2 3,613,979 - BWI76_RS17420 0.62 -1.3 3,614,032 - BWI76_RS17420 0.68 +0.9 3,614,462 + BWI76_RS17425 0.43 -0.5 3,614,470 - BWI76_RS17425 0.45 -0.1 3,614,653 + +0.1 3,614,805 - BWI76_RS17430 0.15 +1.6
Or see this region's nucleotide sequence