Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12885 and BWI76_RS12890 are separated by 192 nucleotides BWI76_RS12890 and BWI76_RS12895 are separated by 168 nucleotides BWI76_RS12895 and BWI76_RS12900 are separated by 194 nucleotides
BWI76_RS12885: BWI76_RS12885 - hypothetical protein, at 2,684,994 to 2,685,414
_RS12885
BWI76_RS12890: BWI76_RS12890 - tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO, at 2,685,607 to 2,686,077
_RS12890
BWI76_RS12895: BWI76_RS12895 - hypothetical protein, at 2,686,246 to 2,686,543
_RS12895
BWI76_RS12900: BWI76_RS12900 - hypothetical protein, at 2,686,738 to 2,688,354
_RS12900
Position (kb)
2686
2687 Strain fitness (log2 ratio)
-1
0
1
2 at 2685.327 kb on + strand, within BWI76_RS12885 at 2685.329 kb on + strand, within BWI76_RS12885 at 2685.337 kb on - strand, within BWI76_RS12885 at 2685.355 kb on - strand, within BWI76_RS12885 at 2685.383 kb on + strand at 2685.730 kb on + strand, within BWI76_RS12890 at 2685.903 kb on + strand, within BWI76_RS12890 at 2685.958 kb on - strand, within BWI76_RS12890 at 2686.253 kb on - strand at 2686.259 kb on - strand at 2686.259 kb on - strand at 2686.322 kb on - strand, within BWI76_RS12895 at 2686.322 kb on - strand, within BWI76_RS12895 at 2686.394 kb on + strand, within BWI76_RS12895 at 2686.432 kb on - strand, within BWI76_RS12895 at 2686.434 kb on - strand, within BWI76_RS12895 at 2686.469 kb on - strand, within BWI76_RS12895 at 2686.546 kb on - strand at 2686.620 kb on + strand at 2686.620 kb on + strand at 2686.620 kb on + strand at 2686.620 kb on + strand at 2686.628 kb on - strand at 2686.628 kb on - strand at 2686.727 kb on - strand at 2686.727 kb on - strand at 2686.733 kb on - strand at 2686.906 kb on - strand, within BWI76_RS12900 at 2686.932 kb on + strand, within BWI76_RS12900 at 2687.030 kb on - strand, within BWI76_RS12900 at 2687.030 kb on - strand, within BWI76_RS12900 at 2687.035 kb on - strand, within BWI76_RS12900 at 2687.061 kb on - strand, within BWI76_RS12900 at 2687.521 kb on - strand, within BWI76_RS12900
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 2,685,327 + BWI76_RS12885 0.79 -0.5 2,685,329 + BWI76_RS12885 0.80 +1.3 2,685,337 - BWI76_RS12885 0.81 +1.5 2,685,355 - BWI76_RS12885 0.86 -0.1 2,685,383 + +2.1 2,685,730 + BWI76_RS12890 0.26 +1.3 2,685,903 + BWI76_RS12890 0.63 +2.3 2,685,958 - BWI76_RS12890 0.75 -0.7 2,686,253 - -1.4 2,686,259 - +2.3 2,686,259 - +1.3 2,686,322 - BWI76_RS12895 0.26 +0.3 2,686,322 - BWI76_RS12895 0.26 -1.4 2,686,394 + BWI76_RS12895 0.50 -1.3 2,686,432 - BWI76_RS12895 0.62 +0.1 2,686,434 - BWI76_RS12895 0.63 +0.1 2,686,469 - BWI76_RS12895 0.75 -0.5 2,686,546 - -0.3 2,686,620 + -0.8 2,686,620 + +0.0 2,686,620 + +0.1 2,686,620 + -0.1 2,686,628 - -1.6 2,686,628 - +1.1 2,686,727 - -1.0 2,686,727 - -0.9 2,686,733 - +0.3 2,686,906 - BWI76_RS12900 0.10 -0.4 2,686,932 + BWI76_RS12900 0.12 -0.7 2,687,030 - BWI76_RS12900 0.18 +1.3 2,687,030 - BWI76_RS12900 0.18 -0.1 2,687,035 - BWI76_RS12900 0.18 -0.2 2,687,061 - BWI76_RS12900 0.20 +1.7 2,687,521 - BWI76_RS12900 0.48 -0.6
Or see this region's nucleotide sequence