Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11925 and BWI76_RS11930 are separated by 329 nucleotides BWI76_RS11930 and BWI76_RS11935 are separated by 245 nucleotides BWI76_RS11935 and BWI76_RS11940 are separated by 394 nucleotides
BWI76_RS11925: BWI76_RS11925 - DNA topoisomerase I, at 2,508,630 to 2,511,227
_RS11925
BWI76_RS11930: BWI76_RS11930 - LysR family transcriptional regulator CysB, at 2,511,557 to 2,512,531
_RS11930
BWI76_RS11935: BWI76_RS11935 - YmiA family putative membrane protein, at 2,512,777 to 2,512,944
_RS11935
BWI76_RS11940: BWI76_RS11940 - aconitate hydratase 1, at 2,513,339 to 2,516,011
_RS11940
Position (kb)
2511
2512
2513 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2511.326 kb on - strand at 2512.580 kb on - strand at 2512.681 kb on + strand at 2512.860 kb on + strand, within BWI76_RS11935 at 2512.871 kb on + strand, within BWI76_RS11935 at 2512.893 kb on + strand, within BWI76_RS11935 at 2512.904 kb on + strand, within BWI76_RS11935 at 2512.904 kb on + strand at 2512.910 kb on + strand, within BWI76_RS11935 at 2512.949 kb on + strand at 2513.077 kb on + strand at 2513.131 kb on - strand at 2513.148 kb on + strand at 2513.151 kb on + strand at 2513.156 kb on - strand at 2513.159 kb on - strand at 2513.159 kb on - strand at 2513.159 kb on - strand at 2513.159 kb on - strand at 2513.159 kb on - strand at 2513.164 kb on - strand at 2513.173 kb on - strand at 2513.174 kb on + strand at 2513.174 kb on - strand at 2513.174 kb on - strand at 2513.174 kb on - strand at 2513.220 kb on + strand at 2513.234 kb on - strand at 2513.301 kb on + strand at 2513.310 kb on - strand at 2513.324 kb on + strand at 2513.326 kb on - strand at 2513.331 kb on - strand at 2513.332 kb on - strand at 2513.357 kb on - strand at 2513.380 kb on + strand at 2513.468 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 2,511,326 - +2.3 2,512,580 - -0.1 2,512,681 + +0.2 2,512,860 + BWI76_RS11935 0.49 -1.0 2,512,871 + BWI76_RS11935 0.56 -0.8 2,512,893 + BWI76_RS11935 0.69 -0.1 2,512,904 + BWI76_RS11935 0.76 -0.4 2,512,904 + +1.0 2,512,910 + BWI76_RS11935 0.79 -0.4 2,512,949 + +1.7 2,513,077 + -1.5 2,513,131 - -1.4 2,513,148 + -0.8 2,513,151 + -0.2 2,513,156 - +0.4 2,513,159 - -0.4 2,513,159 - -1.2 2,513,159 - -0.5 2,513,159 - -1.1 2,513,159 - +0.1 2,513,164 - +0.5 2,513,173 - -1.3 2,513,174 + -0.6 2,513,174 - -2.7 2,513,174 - -0.7 2,513,174 - +0.1 2,513,220 + +0.1 2,513,234 - -1.1 2,513,301 + +1.6 2,513,310 - +0.1 2,513,324 + -0.2 2,513,326 - +0.3 2,513,331 - +1.7 2,513,332 - +0.2 2,513,357 - +1.6 2,513,380 + +0.9 2,513,468 + +0.9
Or see this region's nucleotide sequence