Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07550 and BWI76_RS07555 are separated by 469 nucleotides BWI76_RS07555 and BWI76_RS07560 are separated by 108 nucleotides
BWI76_RS07550: BWI76_RS07550 - Zn-dependent hydrolase, at 1,597,938 to 1,599,206
_RS07550
BWI76_RS07555: BWI76_RS07555 - EamA family transporter, at 1,599,676 to 1,600,566
_RS07555
BWI76_RS07560: BWI76_RS07560 - aminotransferase regulator domain-containing protein, at 1,600,675 to 1,602,009
_RS07560
Position (kb)
1599
1600
1601 Strain fitness (log2 ratio)
-1
0
1
2 at 1598.774 kb on + strand, within BWI76_RS07550 at 1598.852 kb on + strand, within BWI76_RS07550 at 1599.053 kb on + strand, within BWI76_RS07550 at 1599.226 kb on - strand at 1599.428 kb on + strand at 1599.602 kb on - strand at 1599.905 kb on + strand, within BWI76_RS07555 at 1599.910 kb on + strand, within BWI76_RS07555 at 1599.918 kb on - strand, within BWI76_RS07555 at 1600.059 kb on - strand at 1600.094 kb on + strand, within BWI76_RS07555 at 1600.130 kb on + strand, within BWI76_RS07555 at 1600.294 kb on - strand, within BWI76_RS07555 at 1600.516 kb on - strand at 1600.516 kb on - strand at 1600.618 kb on - strand at 1600.749 kb on - strand at 1600.771 kb on - strand at 1600.969 kb on + strand, within BWI76_RS07560 at 1600.982 kb on - strand, within BWI76_RS07560 at 1601.156 kb on + strand, within BWI76_RS07560 at 1601.225 kb on - strand, within BWI76_RS07560 at 1601.352 kb on - strand, within BWI76_RS07560 at 1601.471 kb on - strand, within BWI76_RS07560
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 1,598,774 + BWI76_RS07550 0.66 +0.6 1,598,852 + BWI76_RS07550 0.72 +0.3 1,599,053 + BWI76_RS07550 0.88 -0.4 1,599,226 - -0.4 1,599,428 + -0.2 1,599,602 - -0.5 1,599,905 + BWI76_RS07555 0.26 -1.4 1,599,910 + BWI76_RS07555 0.26 +0.0 1,599,918 - BWI76_RS07555 0.27 -0.7 1,600,059 - +2.2 1,600,094 + BWI76_RS07555 0.47 +0.4 1,600,130 + BWI76_RS07555 0.51 +0.4 1,600,294 - BWI76_RS07555 0.69 -0.8 1,600,516 - -1.0 1,600,516 - +0.3 1,600,618 - +1.1 1,600,749 - +0.3 1,600,771 - +0.1 1,600,969 + BWI76_RS07560 0.22 -0.4 1,600,982 - BWI76_RS07560 0.23 -0.3 1,601,156 + BWI76_RS07560 0.36 -1.2 1,601,225 - BWI76_RS07560 0.41 -1.1 1,601,352 - BWI76_RS07560 0.51 -0.7 1,601,471 - BWI76_RS07560 0.60 +0.4
Or see this region's nucleotide sequence