Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06125 and BWI76_RS06130 are separated by 101 nucleotides BWI76_RS06130 and BWI76_RS06135 are separated by 169 nucleotides BWI76_RS06135 and BWI76_RS06140 are separated by 178 nucleotides
BWI76_RS06125: BWI76_RS06125 - D-alanine--D-alanine ligase A, at 1,286,865 to 1,287,962
_RS06125
BWI76_RS06130: BWI76_RS06130 - extensin family protein, at 1,288,064 to 1,288,747
_RS06130
BWI76_RS06135: BWI76_RS06135 - MFS transporter, at 1,288,917 to 1,290,116
_RS06135
BWI76_RS06140: BWI76_RS06140 - gluconate 5-dehydrogenase, at 1,290,295 to 1,291,059
_RS06140
Position (kb)
1288
1289
1290
1291 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7
8
9 at 1287.990 kb on + strand at 1288.076 kb on + strand at 1288.122 kb on + strand at 1288.615 kb on + strand, within BWI76_RS06130 at 1288.623 kb on - strand, within BWI76_RS06130 at 1288.768 kb on - strand at 1288.768 kb on - strand at 1289.043 kb on + strand, within BWI76_RS06135 at 1289.056 kb on + strand, within BWI76_RS06135 at 1289.240 kb on + strand, within BWI76_RS06135 at 1289.294 kb on + strand, within BWI76_RS06135 at 1289.345 kb on + strand, within BWI76_RS06135 at 1289.545 kb on + strand, within BWI76_RS06135 at 1289.758 kb on + strand, within BWI76_RS06135 at 1289.923 kb on + strand, within BWI76_RS06135 at 1290.027 kb on - strand at 1290.119 kb on - strand at 1290.341 kb on + strand at 1290.346 kb on + strand at 1290.351 kb on + strand at 1290.352 kb on - strand at 1290.354 kb on - strand at 1290.364 kb on + strand at 1290.364 kb on + strand at 1290.397 kb on + strand, within BWI76_RS06140 at 1290.475 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.485 kb on + strand, within BWI76_RS06140 at 1290.486 kb on - strand, within BWI76_RS06140 at 1290.493 kb on - strand, within BWI76_RS06140 at 1290.493 kb on - strand, within BWI76_RS06140 at 1290.493 kb on - strand, within BWI76_RS06140 at 1290.493 kb on - strand, within BWI76_RS06140 at 1290.493 kb on - strand, within BWI76_RS06140 at 1290.493 kb on - strand, within BWI76_RS06140 at 1290.493 kb on - strand, within BWI76_RS06140 at 1290.493 kb on - strand, within BWI76_RS06140 at 1290.493 kb on - strand, within BWI76_RS06140 at 1290.493 kb on - strand, within BWI76_RS06140 at 1290.493 kb on - strand, within BWI76_RS06140 at 1290.495 kb on + strand, within BWI76_RS06140 at 1290.510 kb on + strand, within BWI76_RS06140 at 1290.519 kb on + strand, within BWI76_RS06140 at 1290.519 kb on + strand, within BWI76_RS06140 at 1290.527 kb on - strand, within BWI76_RS06140 at 1290.530 kb on + strand, within BWI76_RS06140 at 1290.531 kb on + strand, within BWI76_RS06140 at 1290.533 kb on + strand, within BWI76_RS06140 at 1290.596 kb on - strand, within BWI76_RS06140 at 1290.613 kb on + strand, within BWI76_RS06140 at 1290.618 kb on + strand, within BWI76_RS06140 at 1290.619 kb on + strand, within BWI76_RS06140 at 1290.627 kb on - strand, within BWI76_RS06140 at 1290.629 kb on + strand, within BWI76_RS06140 at 1290.629 kb on + strand at 1290.629 kb on + strand, within BWI76_RS06140 at 1290.629 kb on + strand, within BWI76_RS06140 at 1290.629 kb on + strand, within BWI76_RS06140 at 1290.629 kb on + strand, within BWI76_RS06140 at 1290.629 kb on + strand, within BWI76_RS06140 at 1290.629 kb on + strand, within BWI76_RS06140 at 1290.629 kb on + strand, within BWI76_RS06140 at 1290.632 kb on + strand, within BWI76_RS06140 at 1290.632 kb on - strand, within BWI76_RS06140 at 1290.637 kb on - strand, within BWI76_RS06140 at 1290.637 kb on - strand, within BWI76_RS06140 at 1290.637 kb on - strand, within BWI76_RS06140 at 1290.637 kb on - strand, within BWI76_RS06140 at 1290.637 kb on - strand, within BWI76_RS06140 at 1290.637 kb on - strand, within BWI76_RS06140 at 1290.639 kb on + strand, within BWI76_RS06140 at 1290.647 kb on - strand, within BWI76_RS06140 at 1290.763 kb on - strand, within BWI76_RS06140 at 1290.773 kb on + strand, within BWI76_RS06140 at 1290.780 kb on - strand, within BWI76_RS06140 at 1290.793 kb on + strand, within BWI76_RS06140 at 1290.795 kb on - strand, within BWI76_RS06140 at 1290.795 kb on - strand, within BWI76_RS06140 at 1290.796 kb on - strand, within BWI76_RS06140 at 1290.808 kb on - strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.812 kb on + strand, within BWI76_RS06140 at 1290.820 kb on - strand, within BWI76_RS06140 at 1290.820 kb on - strand, within BWI76_RS06140 at 1290.820 kb on - strand, within BWI76_RS06140 at 1290.820 kb on - strand, within BWI76_RS06140 at 1290.820 kb on - strand, within BWI76_RS06140 at 1290.820 kb on - strand, within BWI76_RS06140 at 1290.820 kb on - strand, within BWI76_RS06140 at 1290.820 kb on - strand, within BWI76_RS06140 at 1290.820 kb on - strand, within BWI76_RS06140 at 1290.840 kb on + strand, within BWI76_RS06140 at 1290.840 kb on + strand, within BWI76_RS06140 at 1290.840 kb on + strand, within BWI76_RS06140 at 1290.854 kb on - strand, within BWI76_RS06140 at 1290.866 kb on - strand, within BWI76_RS06140 at 1290.876 kb on + strand, within BWI76_RS06140 at 1290.876 kb on + strand, within BWI76_RS06140 at 1290.881 kb on + strand, within BWI76_RS06140 at 1290.881 kb on + strand, within BWI76_RS06140 at 1290.884 kb on - strand, within BWI76_RS06140 at 1290.884 kb on - strand, within BWI76_RS06140 at 1290.886 kb on + strand, within BWI76_RS06140 at 1290.886 kb on + strand, within BWI76_RS06140 at 1290.886 kb on + strand, within BWI76_RS06140 at 1290.886 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.891 kb on + strand, within BWI76_RS06140 at 1290.894 kb on - strand, within BWI76_RS06140 at 1290.897 kb on + strand, within BWI76_RS06140 at 1290.898 kb on + strand, within BWI76_RS06140 at 1290.899 kb on - strand, within BWI76_RS06140 at 1290.899 kb on - strand, within BWI76_RS06140 at 1290.899 kb on - strand, within BWI76_RS06140 at 1290.899 kb on - strand, within BWI76_RS06140 at 1290.899 kb on - strand, within BWI76_RS06140 at 1290.899 kb on - strand, within BWI76_RS06140 at 1290.899 kb on - strand, within BWI76_RS06140 at 1290.899 kb on - strand, within BWI76_RS06140 at 1290.899 kb on - strand, within BWI76_RS06140 at 1290.899 kb on - strand, within BWI76_RS06140 at 1290.899 kb on - strand, within BWI76_RS06140 at 1290.917 kb on + strand, within BWI76_RS06140 at 1290.921 kb on + strand, within BWI76_RS06140 at 1290.929 kb on - strand, within BWI76_RS06140 at 1290.929 kb on - strand, within BWI76_RS06140 at 1290.932 kb on + strand, within BWI76_RS06140 at 1290.940 kb on - strand, within BWI76_RS06140 at 1290.966 kb on + strand, within BWI76_RS06140 at 1290.987 kb on - strand at 1291.018 kb on + strand at 1291.018 kb on + strand at 1291.037 kb on + strand at 1291.045 kb on - strand at 1291.054 kb on + strand at 1291.054 kb on + strand at 1291.054 kb on + strand at 1291.056 kb on + strand at 1291.062 kb on - strand at 1291.062 kb on - strand at 1291.062 kb on - strand at 1291.062 kb on - strand at 1291.072 kb on + strand at 1291.072 kb on - strand at 1291.073 kb on + strand at 1291.073 kb on + strand at 1291.073 kb on + strand at 1291.075 kb on + strand at 1291.080 kb on - strand at 1291.083 kb on - strand at 1291.083 kb on - strand at 1291.098 kb on + strand at 1291.098 kb on + strand at 1291.098 kb on + strand at 1291.098 kb on + strand at 1291.098 kb on + strand at 1291.106 kb on - strand at 1291.106 kb on - strand at 1291.106 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 1,287,990 + +0.6 1,288,076 + -0.8 1,288,122 + +0.8 1,288,615 + BWI76_RS06130 0.81 -1.4 1,288,623 - BWI76_RS06130 0.82 +0.6 1,288,768 - -1.6 1,288,768 - -0.2 1,289,043 + BWI76_RS06135 0.10 +0.5 1,289,056 + BWI76_RS06135 0.12 +0.6 1,289,240 + BWI76_RS06135 0.27 +0.2 1,289,294 + BWI76_RS06135 0.31 +1.8 1,289,345 + BWI76_RS06135 0.36 -0.5 1,289,545 + BWI76_RS06135 0.52 +1.6 1,289,758 + BWI76_RS06135 0.70 +0.8 1,289,923 + BWI76_RS06135 0.84 +0.8 1,290,027 - +0.9 1,290,119 - -0.4 1,290,341 + -0.5 1,290,346 + -0.6 1,290,351 + +0.5 1,290,352 - -0.4 1,290,354 - -2.0 1,290,364 + +0.8 1,290,364 + -0.2 1,290,397 + BWI76_RS06140 0.13 -1.2 1,290,475 + BWI76_RS06140 0.24 -1.2 1,290,485 + BWI76_RS06140 0.25 +0.5 1,290,485 + BWI76_RS06140 0.25 -0.3 1,290,485 + BWI76_RS06140 0.25 +1.0 1,290,485 + BWI76_RS06140 0.25 -0.3 1,290,485 + BWI76_RS06140 0.25 +1.0 1,290,485 + BWI76_RS06140 0.25 -0.3 1,290,485 + BWI76_RS06140 0.25 -0.4 1,290,485 + BWI76_RS06140 0.25 +1.0 1,290,485 + BWI76_RS06140 0.25 -1.4 1,290,485 + BWI76_RS06140 0.25 +0.0 1,290,485 + BWI76_RS06140 0.25 -0.2 1,290,485 + BWI76_RS06140 0.25 -1.3 1,290,485 + BWI76_RS06140 0.25 -0.4 1,290,486 - BWI76_RS06140 0.25 +1.2 1,290,493 - BWI76_RS06140 0.26 +0.1 1,290,493 - BWI76_RS06140 0.26 -1.2 1,290,493 - BWI76_RS06140 0.26 +1.4 1,290,493 - BWI76_RS06140 0.26 +0.4 1,290,493 - BWI76_RS06140 0.26 -0.3 1,290,493 - BWI76_RS06140 0.26 -0.2 1,290,493 - BWI76_RS06140 0.26 +1.0 1,290,493 - BWI76_RS06140 0.26 +2.4 1,290,493 - BWI76_RS06140 0.26 -0.4 1,290,493 - BWI76_RS06140 0.26 -0.8 1,290,493 - BWI76_RS06140 0.26 +0.3 1,290,495 + BWI76_RS06140 0.26 -0.2 1,290,510 + BWI76_RS06140 0.28 +0.4 1,290,519 + BWI76_RS06140 0.29 -0.5 1,290,519 + BWI76_RS06140 0.29 -0.1 1,290,527 - BWI76_RS06140 0.30 -0.5 1,290,530 + BWI76_RS06140 0.31 -1.3 1,290,531 + BWI76_RS06140 0.31 -0.1 1,290,533 + BWI76_RS06140 0.31 -0.3 1,290,596 - BWI76_RS06140 0.39 -1.2 1,290,613 + BWI76_RS06140 0.42 -0.6 1,290,618 + BWI76_RS06140 0.42 +0.6 1,290,619 + BWI76_RS06140 0.42 -0.4 1,290,627 - BWI76_RS06140 0.43 +0.7 1,290,629 + BWI76_RS06140 0.44 -0.6 1,290,629 + +2.4 1,290,629 + BWI76_RS06140 0.44 -0.4 1,290,629 + BWI76_RS06140 0.44 +1.0 1,290,629 + BWI76_RS06140 0.44 +1.1 1,290,629 + BWI76_RS06140 0.44 -0.4 1,290,629 + BWI76_RS06140 0.44 -0.7 1,290,629 + BWI76_RS06140 0.44 -0.3 1,290,629 + BWI76_RS06140 0.44 -1.5 1,290,632 + BWI76_RS06140 0.44 -0.1 1,290,632 - BWI76_RS06140 0.44 +0.3 1,290,637 - BWI76_RS06140 0.45 +0.1 1,290,637 - BWI76_RS06140 0.45 -2.3 1,290,637 - BWI76_RS06140 0.45 +0.4 1,290,637 - BWI76_RS06140 0.45 +0.7 1,290,637 - BWI76_RS06140 0.45 -1.0 1,290,637 - BWI76_RS06140 0.45 -0.5 1,290,639 + BWI76_RS06140 0.45 -0.2 1,290,647 - BWI76_RS06140 0.46 +0.3 1,290,763 - BWI76_RS06140 0.61 +0.2 1,290,773 + BWI76_RS06140 0.62 -0.3 1,290,780 - BWI76_RS06140 0.63 +0.3 1,290,793 + BWI76_RS06140 0.65 -1.1 1,290,795 - BWI76_RS06140 0.65 -0.6 1,290,795 - BWI76_RS06140 0.65 +0.6 1,290,796 - BWI76_RS06140 0.65 +0.6 1,290,808 - BWI76_RS06140 0.67 +1.7 1,290,812 + BWI76_RS06140 0.68 +1.4 1,290,812 + BWI76_RS06140 0.68 -1.6 1,290,812 + BWI76_RS06140 0.68 +2.3 1,290,812 + BWI76_RS06140 0.68 -0.1 1,290,812 + BWI76_RS06140 0.68 -1.2 1,290,812 + BWI76_RS06140 0.68 -0.0 1,290,812 + BWI76_RS06140 0.68 +0.5 1,290,812 + BWI76_RS06140 0.68 +0.5 1,290,812 + BWI76_RS06140 0.68 +0.3 1,290,812 + BWI76_RS06140 0.68 -0.3 1,290,812 + BWI76_RS06140 0.68 +0.1 1,290,812 + BWI76_RS06140 0.68 -0.3 1,290,812 + BWI76_RS06140 0.68 +0.2 1,290,812 + BWI76_RS06140 0.68 -0.1 1,290,820 - BWI76_RS06140 0.69 -1.3 1,290,820 - BWI76_RS06140 0.69 -0.3 1,290,820 - BWI76_RS06140 0.69 -0.8 1,290,820 - BWI76_RS06140 0.69 -1.7 1,290,820 - BWI76_RS06140 0.69 -0.1 1,290,820 - BWI76_RS06140 0.69 +0.1 1,290,820 - BWI76_RS06140 0.69 -1.2 1,290,820 - BWI76_RS06140 0.69 +1.6 1,290,820 - BWI76_RS06140 0.69 -0.2 1,290,840 + BWI76_RS06140 0.71 +0.6 1,290,840 + BWI76_RS06140 0.71 +0.2 1,290,840 + BWI76_RS06140 0.71 -0.5 1,290,854 - BWI76_RS06140 0.73 +0.7 1,290,866 - BWI76_RS06140 0.75 +0.2 1,290,876 + BWI76_RS06140 0.76 -0.5 1,290,876 + BWI76_RS06140 0.76 -0.2 1,290,881 + BWI76_RS06140 0.77 -0.1 1,290,881 + BWI76_RS06140 0.77 +0.6 1,290,884 - BWI76_RS06140 0.77 +0.7 1,290,884 - BWI76_RS06140 0.77 +1.7 1,290,886 + BWI76_RS06140 0.77 -0.0 1,290,886 + BWI76_RS06140 0.77 -0.5 1,290,886 + BWI76_RS06140 0.77 -0.1 1,290,886 + BWI76_RS06140 0.77 +0.8 1,290,891 + BWI76_RS06140 0.78 +0.7 1,290,891 + BWI76_RS06140 0.78 -0.0 1,290,891 + BWI76_RS06140 0.78 +0.8 1,290,891 + BWI76_RS06140 0.78 -1.7 1,290,891 + BWI76_RS06140 0.78 -0.1 1,290,891 + BWI76_RS06140 0.78 -0.0 1,290,891 + BWI76_RS06140 0.78 +1.7 1,290,891 + BWI76_RS06140 0.78 +0.9 1,290,891 + BWI76_RS06140 0.78 -0.4 1,290,891 + BWI76_RS06140 0.78 -0.6 1,290,891 + BWI76_RS06140 0.78 +0.0 1,290,891 + BWI76_RS06140 0.78 -1.2 1,290,891 + BWI76_RS06140 0.78 -1.5 1,290,891 + BWI76_RS06140 0.78 -0.3 1,290,891 + BWI76_RS06140 0.78 -0.1 1,290,891 + BWI76_RS06140 0.78 +1.3 1,290,891 + BWI76_RS06140 0.78 +0.1 1,290,891 + BWI76_RS06140 0.78 -0.5 1,290,891 + BWI76_RS06140 0.78 +0.1 1,290,894 - BWI76_RS06140 0.78 +3.4 1,290,897 + BWI76_RS06140 0.79 +0.1 1,290,898 + BWI76_RS06140 0.79 +0.6 1,290,899 - BWI76_RS06140 0.79 -0.5 1,290,899 - BWI76_RS06140 0.79 -0.4 1,290,899 - BWI76_RS06140 0.79 -0.3 1,290,899 - BWI76_RS06140 0.79 -1.1 1,290,899 - BWI76_RS06140 0.79 -0.0 1,290,899 - BWI76_RS06140 0.79 -1.4 1,290,899 - BWI76_RS06140 0.79 -0.9 1,290,899 - BWI76_RS06140 0.79 +0.9 1,290,899 - BWI76_RS06140 0.79 +9.1 1,290,899 - BWI76_RS06140 0.79 -0.7 1,290,899 - BWI76_RS06140 0.79 -0.4 1,290,917 + BWI76_RS06140 0.81 -0.6 1,290,921 + BWI76_RS06140 0.82 -0.4 1,290,929 - BWI76_RS06140 0.83 -0.5 1,290,929 - BWI76_RS06140 0.83 +0.1 1,290,932 + BWI76_RS06140 0.83 +0.1 1,290,940 - BWI76_RS06140 0.84 -0.5 1,290,966 + BWI76_RS06140 0.88 -0.4 1,290,987 - -0.1 1,291,018 + +0.7 1,291,018 + +0.4 1,291,037 + +0.1 1,291,045 - +0.8 1,291,054 + -0.7 1,291,054 + -0.0 1,291,054 + -1.2 1,291,056 + -0.5 1,291,062 - -0.2 1,291,062 - -0.4 1,291,062 - -0.4 1,291,062 - -1.0 1,291,072 + -0.9 1,291,072 - -0.1 1,291,073 + +0.1 1,291,073 + -0.5 1,291,073 + -1.1 1,291,075 + +0.0 1,291,080 - +0.4 1,291,083 - -0.8 1,291,083 - -1.4 1,291,098 + +0.6 1,291,098 + +0.8 1,291,098 + -2.0 1,291,098 + -2.5 1,291,098 + +0.8 1,291,106 - -0.9 1,291,106 - -0.5 1,291,106 - -0.6
Or see this region's nucleotide sequence