Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05640 and BWI76_RS05645 are separated by 136 nucleotides BWI76_RS05645 and BWI76_RS05650 are separated by 76 nucleotides
BWI76_RS05640: BWI76_RS05640 - GntR family transcriptional regulator, at 1,183,930 to 1,184,706
_RS05640
BWI76_RS05645: BWI76_RS05645 - fructuronate reductase, at 1,184,843 to 1,186,318
_RS05645
BWI76_RS05650: BWI76_RS05650 - mannonate dehydratase, at 1,186,395 to 1,187,579
_RS05650
Position (kb)
1184
1185
1186
1187 Strain fitness (log2 ratio)
-1
0
1 at 1184.124 kb on - strand, within BWI76_RS05640 at 1184.124 kb on - strand, within BWI76_RS05640 at 1184.205 kb on + strand, within BWI76_RS05640 at 1185.229 kb on + strand, within BWI76_RS05645 at 1185.264 kb on + strand, within BWI76_RS05645 at 1185.272 kb on - strand, within BWI76_RS05645 at 1185.719 kb on - strand, within BWI76_RS05645 at 1185.821 kb on + strand, within BWI76_RS05645 at 1185.829 kb on - strand, within BWI76_RS05645 at 1186.333 kb on - strand at 1186.673 kb on + strand, within BWI76_RS05650 at 1186.681 kb on - strand, within BWI76_RS05650 at 1186.691 kb on - strand, within BWI76_RS05650 at 1186.701 kb on - strand, within BWI76_RS05650 at 1186.772 kb on + strand, within BWI76_RS05650 at 1187.019 kb on + strand, within BWI76_RS05650 at 1187.022 kb on - strand, within BWI76_RS05650 at 1187.044 kb on + strand, within BWI76_RS05650 at 1187.168 kb on + strand, within BWI76_RS05650 at 1187.204 kb on + strand, within BWI76_RS05650 at 1187.214 kb on - strand, within BWI76_RS05650 at 1187.290 kb on + strand, within BWI76_RS05650 at 1187.304 kb on - strand, within BWI76_RS05650
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 1,184,124 - BWI76_RS05640 0.25 +0.2 1,184,124 - BWI76_RS05640 0.25 +0.1 1,184,205 + BWI76_RS05640 0.35 -0.2 1,185,229 + BWI76_RS05645 0.26 -0.0 1,185,264 + BWI76_RS05645 0.29 -1.4 1,185,272 - BWI76_RS05645 0.29 -0.7 1,185,719 - BWI76_RS05645 0.59 -0.7 1,185,821 + BWI76_RS05645 0.66 +0.3 1,185,829 - BWI76_RS05645 0.67 -0.6 1,186,333 - +0.6 1,186,673 + BWI76_RS05650 0.23 -1.5 1,186,681 - BWI76_RS05650 0.24 -0.7 1,186,691 - BWI76_RS05650 0.25 -0.7 1,186,701 - BWI76_RS05650 0.26 +0.1 1,186,772 + BWI76_RS05650 0.32 -0.2 1,187,019 + BWI76_RS05650 0.53 +0.7 1,187,022 - BWI76_RS05650 0.53 -0.9 1,187,044 + BWI76_RS05650 0.55 -1.3 1,187,168 + BWI76_RS05650 0.65 +0.3 1,187,204 + BWI76_RS05650 0.68 -0.2 1,187,214 - BWI76_RS05650 0.69 +0.7 1,187,290 + BWI76_RS05650 0.76 +0.8 1,187,304 - BWI76_RS05650 0.77 +0.3
Or see this region's nucleotide sequence