Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04170 and BWI76_RS04175 are separated by 98 nucleotides BWI76_RS04175 and BWI76_RS04180 overlap by 60 nucleotides BWI76_RS04180 and BWI76_RS04185 are separated by 125 nucleotides
BWI76_RS04170: BWI76_RS04170 - trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR, at 858,057 to 859,289
_RS04170
BWI76_RS04175: BWI76_RS04175 - energy-dependent translational throttle protein EttA, at 859,388 to 861,055
_RS04175
BWI76_RS04180: BWI76_RS04180 - hypothetical protein, at 860,996 to 861,203
_RS04180
BWI76_RS04185: BWI76_RS04185 - murein transglycosylase, at 861,329 to 863,266
_RS04185
Position (kb) 859
860
861
862 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 858.530 kb on - strand, within BWI76_RS04170 at 858.594 kb on - strand, within BWI76_RS04170 at 858.772 kb on - strand, within BWI76_RS04170 at 858.893 kb on + strand, within BWI76_RS04170 at 859.069 kb on + strand, within BWI76_RS04170 at 859.127 kb on - strand, within BWI76_RS04170 at 859.167 kb on + strand at 859.208 kb on - strand at 859.257 kb on - strand at 859.318 kb on + strand at 859.507 kb on + strand at 859.589 kb on + strand, within BWI76_RS04175 at 859.713 kb on + strand, within BWI76_RS04175 at 859.742 kb on - strand, within BWI76_RS04175 at 860.196 kb on + strand, within BWI76_RS04175 at 861.021 kb on - strand at 861.062 kb on - strand, within BWI76_RS04180 at 861.082 kb on + strand, within BWI76_RS04180 at 861.118 kb on + strand, within BWI76_RS04180 at 861.126 kb on - strand, within BWI76_RS04180 at 861.131 kb on - strand, within BWI76_RS04180 at 861.133 kb on + strand, within BWI76_RS04180 at 861.176 kb on + strand, within BWI76_RS04180 at 861.293 kb on + strand at 861.530 kb on - strand, within BWI76_RS04185 at 861.687 kb on + strand, within BWI76_RS04185 at 861.768 kb on - strand, within BWI76_RS04185 at 861.778 kb on - strand, within BWI76_RS04185 at 861.835 kb on + strand, within BWI76_RS04185 at 861.897 kb on - strand, within BWI76_RS04185 at 862.016 kb on + strand, within BWI76_RS04185
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 858,530 - BWI76_RS04170 0.38 -0.9 858,594 - BWI76_RS04170 0.44 -1.4 858,772 - BWI76_RS04170 0.58 -0.3 858,893 + BWI76_RS04170 0.68 -2.6 859,069 + BWI76_RS04170 0.82 +1.9 859,127 - BWI76_RS04170 0.87 -0.3 859,167 + +0.3 859,208 - -0.9 859,257 - +0.7 859,318 + +0.6 859,507 + +2.2 859,589 + BWI76_RS04175 0.12 -0.8 859,713 + BWI76_RS04175 0.19 -1.2 859,742 - BWI76_RS04175 0.21 -1.3 860,196 + BWI76_RS04175 0.48 -3.2 861,021 - +1.7 861,062 - BWI76_RS04180 0.32 -0.7 861,082 + BWI76_RS04180 0.41 -1.3 861,118 + BWI76_RS04180 0.59 -0.2 861,126 - BWI76_RS04180 0.62 -0.5 861,131 - BWI76_RS04180 0.65 -1.3 861,133 + BWI76_RS04180 0.66 -0.1 861,176 + BWI76_RS04180 0.87 -1.6 861,293 + +0.7 861,530 - BWI76_RS04185 0.10 -0.2 861,687 + BWI76_RS04185 0.18 -0.5 861,768 - BWI76_RS04185 0.23 -0.9 861,778 - BWI76_RS04185 0.23 -0.8 861,835 + BWI76_RS04185 0.26 -0.4 861,897 - BWI76_RS04185 0.29 +1.2 862,016 + BWI76_RS04185 0.35 -0.9
Or see this region's nucleotide sequence