Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03590 and BWI76_RS03595 are separated by 53 nucleotides BWI76_RS03595 and BWI76_RS03600 are separated by 15 nucleotides BWI76_RS03600 and BWI76_RS03605 are separated by 17 nucleotides BWI76_RS03605 and BWI76_RS03610 are separated by 406 nucleotides BWI76_RS03610 and BWI76_RS03615 overlap by 4 nucleotides
BWI76_RS03590: BWI76_RS03590 - acetaldehyde dehydrogenase (acetylating), at 744,308 to 745,909
_RS03590
BWI76_RS03595: BWI76_RS03595 - ethanolamine utilization protein EutM, at 745,963 to 746,241
_RS03595
BWI76_RS03600: BWI76_RS03600 - BMC domain-containing protein, at 746,257 to 746,541
_RS03600
BWI76_RS03605: BWI76_RS03605 - BMC domain-containing protein, at 746,559 to 746,837
_RS03605
BWI76_RS03610: BWI76_RS03610 - hypothetical protein, at 747,244 to 747,762
_RS03610
BWI76_RS03615: BWI76_RS03615 - putative transcriptional regulatory protein, at 747,759 to 748,559
_RS03615
Position (kb) 746
747 Strain fitness (log2 ratio) -2
-1
0
1 at 745.869 kb on - strand at 745.883 kb on + strand at 746.034 kb on - strand, within BWI76_RS03595 at 746.173 kb on - strand, within BWI76_RS03595 at 746.505 kb on - strand, within BWI76_RS03600 at 746.523 kb on + strand at 746.557 kb on - strand at 746.557 kb on - strand at 746.695 kb on + strand, within BWI76_RS03605 at 746.725 kb on - strand, within BWI76_RS03605 at 746.769 kb on - strand, within BWI76_RS03605 at 746.819 kb on + strand at 746.819 kb on + strand at 746.827 kb on - strand at 746.827 kb on - strand at 747.301 kb on + strand, within BWI76_RS03610 at 747.338 kb on + strand, within BWI76_RS03610 at 747.652 kb on + strand, within BWI76_RS03610 at 747.722 kb on + strand at 747.809 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 745,869 - -0.1 745,883 + -1.6 746,034 - BWI76_RS03595 0.25 -1.6 746,173 - BWI76_RS03595 0.75 +0.3 746,505 - BWI76_RS03600 0.87 -1.7 746,523 + -1.8 746,557 - -1.6 746,557 - +0.2 746,695 + BWI76_RS03605 0.49 +0.5 746,725 - BWI76_RS03605 0.59 -1.4 746,769 - BWI76_RS03605 0.75 -1.6 746,819 + -1.6 746,819 + +0.3 746,827 - -0.8 746,827 - -1.8 747,301 + BWI76_RS03610 0.11 +0.5 747,338 + BWI76_RS03610 0.18 +0.3 747,652 + BWI76_RS03610 0.79 +1.6 747,722 + +0.7 747,809 + +1.2
Or see this region's nucleotide sequence