Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3362

Experiment: Def Vancomycin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Vancomycin 0.008 mg/ml
3,530,535	+		Psest_3360	0.49	-1.7
3,530,535	+		Psest_3360	0.49	+0.7
3,530,535	+		Psest_3360	0.49	-0.1
3,530,535	+		Psest_3360	0.49	-1.1
3,530,535	+		Psest_3360	0.49	-0.7
3,530,535	+		Psest_3360	0.49	+0.5
3,530,536	-		Psest_3360	0.50	+0.9
3,530,536	-		Psest_3360	0.50	+2.2
3,530,562	+		Psest_3360	0.54	-0.1
3,530,562	+		Psest_3360	0.54	+0.6
3,530,562	+		Psest_3360	0.54	+0.6
3,530,562	+		Psest_3360	0.54	+0.7
3,530,563	-		Psest_3360	0.54	+0.8
3,530,563	-		Psest_3360	0.54	+0.4
3,530,563	-		Psest_3360	0.54	-0.1
3,530,599	-		Psest_3360	0.61	-1.3
3,530,624	+		Psest_3360	0.65	-0.7
3,530,676	+		Psest_3360	0.75	+2.7
3,530,676	+		Psest_3360	0.75	+1.7
3,530,676	+		Psest_3360	0.75	-0.1
3,530,677	-		Psest_3360	0.75	-2.2
3,530,677	-		Psest_3360	0.75	-0.8
3,530,677	-		Psest_3360	0.75	-1.1
3,530,677	-		Psest_3360	0.75	-1.0
3,530,677	-		Psest_3360	0.75	+0.3
3,530,871	-				-0.0
3,530,907	+				+2.7
3,530,907	+				+0.3
3,530,908	-				-0.3
3,530,999	+		Psest_3361	0.22	-0.4
3,530,999	+		Psest_3361	0.22	-0.9
3,531,000	-		Psest_3361	0.22	-0.7
3,531,213	-		Psest_3361	0.69	+1.3
3,531,213	-		Psest_3361	0.69	-0.4
3,531,213	-		Psest_3361	0.69	-1.1
3,531,299	+		Psest_3361	0.88	-0.1
3,531,388	+				+0.3
3,531,389	-				-0.9
3,531,389	-				+2.0
3,531,415	+				-0.9
3,531,415	+				+0.3
3,531,660	-		Psest_3362	0.31	-0.1
3,531,919	+		Psest_3362	0.59	-0.4
3,531,920	-		Psest_3362	0.59	+0.1
3,531,920	-		Psest_3362	0.59	+0.3
3,531,923	+		Psest_3362	0.59	-0.0
3,531,923	+		Psest_3362	0.59	-1.3
3,531,923	+		Psest_3362	0.59	-0.7
3,531,923	+		Psest_3362	0.59	+1.3
3,531,923	+		Psest_3362	0.59	+1.7
3,531,923	+		Psest_3362	0.59	-1.8
3,531,923	+		Psest_3362	0.59	-2.9
3,531,923	+		Psest_3362	0.59	-1.3
3,531,924	-		Psest_3362	0.59	-1.3
3,531,924	-		Psest_3362	0.59	-0.6
3,531,924	-		Psest_3362	0.59	-1.9
3,531,924	-		Psest_3362	0.59	+0.3
3,531,924	-		Psest_3362	0.59	+1.7
3,531,924	-		Psest_3362	0.59	-0.4
3,531,924	-		Psest_3362	0.59	-1.3
3,531,924	-		Psest_3362	0.59	-0.3
3,531,924	-		Psest_3362	0.59	+0.7
3,531,924	-		Psest_3362	0.59	+0.1
3,531,924	-		Psest_3362	0.59	-1.6
3,531,924	-		Psest_3362	0.59	+1.1
3,532,048	+		Psest_3362	0.73	+0.1
3,532,048	+		Psest_3362	0.73	-0.4
3,532,048	+		Psest_3362	0.73	+0.7
3,532,048	+		Psest_3362	0.73	-0.0
3,532,048	+		Psest_3362	0.73	-0.2
3,532,048	+		Psest_3362	0.73	+1.2
3,532,049	-		Psest_3362	0.73	+0.2
3,532,049	-		Psest_3362	0.73	-0.2
3,532,049	-		Psest_3362	0.73	+1.7
3,532,049	-		Psest_3362	0.73	-0.1
3,532,049	-		Psest_3362	0.73	-0.5
3,532,049	-		Psest_3362	0.73	+0.6
3,532,104	+		Psest_3362	0.79	+0.1
3,532,105	-		Psest_3362	0.79	-1.7
3,532,174	+		Psest_3362	0.86	-1.2
3,532,174	+		Psest_3362	0.86	-1.8
3,532,174	+		Psest_3362	0.86	+1.7
3,532,174	+		Psest_3362	0.86	-0.2
3,532,174	+		Psest_3362	0.86	+0.7
3,532,175	-		Psest_3362	0.86	-0.7
3,532,213	+				+0.9
3,532,214	-				-1.3
3,532,394	+				+3.3
3,532,405	+				+1.2
3,532,405	+				-0.1
3,532,405	+				+0.3
3,532,406	-				-0.6
3,532,406	-				-0.9
3,532,531	+				+2.4
3,532,531	+				+0.1
3,532,531	+				+1.7
3,532,532	-				+0.5
3,532,532	-				-0.7
3,532,532	-				+0.7
3,532,586	+		Psest_3363	0.18	+1.2
3,532,587	-		Psest_3363	0.18	-0.3
3,532,587	-		Psest_3363	0.18	+0.5
3,532,587	-		Psest_3363	0.18	-0.5
3,532,587	-		Psest_3363	0.18	+0.2
3,532,587	-		Psest_3363	0.18	-0.9
3,532,587	-		Psest_3363	0.18	+0.3
3,532,587	-		Psest_3363	0.18	-0.7
3,532,587	-		Psest_3363	0.18	+0.5
3,532,587	-		Psest_3363	0.18	-1.0
3,532,587	-		Psest_3363	0.18	+0.7
3,532,905	+				-0.1
3,532,905	+				+0.1
3,532,905	+				+2.3
3,532,905	+				-1.5
3,532,905	+				-1.0
3,532,905	+				-0.1
3,532,905	+				+0.7
3,532,905	+				+0.4
3,532,905	+				+2.7
3,532,905	+				-0.3
3,532,905	+				-0.8
3,532,905	+				+0.3
3,532,906	-				-0.7
3,532,906	-				-0.1
3,532,906	-				-0.5
3,532,906	-				-0.4
3,532,907	+				-0.1
3,532,908	-				-2.6
3,532,908	-				-1.4
3,533,116	+		Psest_3364	0.13	+1.1
3,533,117	-		Psest_3364	0.13	+0.2