Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3364

Experiment: RCH2 defined media

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2 defined media
3,532,048	+		Psest_3362	0.73	+0.6
3,532,048	+		Psest_3362	0.73	+0.3
3,532,048	+		Psest_3362	0.73	-0.7
3,532,048	+		Psest_3362	0.73	+0.3
3,532,048	+		Psest_3362	0.73	+0.0
3,532,048	+		Psest_3362	0.73	+0.0
3,532,049	-		Psest_3362	0.73	-0.7
3,532,049	-		Psest_3362	0.73	+0.5
3,532,049	-		Psest_3362	0.73	+0.8
3,532,049	-		Psest_3362	0.73	-1.1
3,532,049	-		Psest_3362	0.73	-0.2
3,532,049	-		Psest_3362	0.73	-0.6
3,532,104	+		Psest_3362	0.79	+0.8
3,532,105	-		Psest_3362	0.79	+0.1
3,532,174	+		Psest_3362	0.86	+0.0
3,532,174	+		Psest_3362	0.86	+0.2
3,532,174	+		Psest_3362	0.86	+1.3
3,532,174	+		Psest_3362	0.86	+0.9
3,532,174	+		Psest_3362	0.86	+2.3
3,532,175	-		Psest_3362	0.86	+0.0
3,532,213	+				+0.9
3,532,214	-				+0.3
3,532,394	+				+1.3
3,532,405	+				+0.3
3,532,405	+				+0.9
3,532,405	+				+0.0
3,532,406	-				-0.1
3,532,406	-				-0.2
3,532,531	+				-1.5
3,532,531	+				+1.8
3,532,531	+				+1.0
3,532,532	-				-0.2
3,532,532	-				+1.0
3,532,532	-				-0.7
3,532,586	+		Psest_3363	0.18	+1.1
3,532,587	-		Psest_3363	0.18	+0.1
3,532,587	-		Psest_3363	0.18	-0.3
3,532,587	-		Psest_3363	0.18	+0.8
3,532,587	-		Psest_3363	0.18	-0.1
3,532,587	-		Psest_3363	0.18	+1.2
3,532,587	-		Psest_3363	0.18	+0.2
3,532,587	-		Psest_3363	0.18	-0.3
3,532,587	-		Psest_3363	0.18	+0.9
3,532,587	-		Psest_3363	0.18	+0.3
3,532,587	-		Psest_3363	0.18	+0.3
3,532,905	+				+0.1
3,532,905	+				-0.2
3,532,905	+				+1.3
3,532,905	+				-0.2
3,532,905	+				+0.7
3,532,905	+				+0.5
3,532,905	+				-0.1
3,532,905	+				+0.1
3,532,905	+				+3.3
3,532,905	+				-0.3
3,532,905	+				-0.2
3,532,905	+				+0.0
3,532,906	-				+0.6
3,532,906	-				-2.0
3,532,906	-				+0.5
3,532,906	-				-0.4
3,532,907	+				+1.0
3,532,908	-				-0.1
3,532,908	-				+0.2
3,533,116	+		Psest_3364	0.13	+1.3
3,533,117	-		Psest_3364	0.13	-0.1
3,533,345	-		Psest_3364	0.30	-0.1
3,533,345	-		Psest_3364	0.30	+0.3
3,533,345	-		Psest_3364	0.30	+1.0
3,533,390	-		Psest_3364	0.33	+0.2
3,533,617	-		Psest_3364	0.50	+0.6
3,533,738	+		Psest_3364	0.58	+1.5
3,534,010	+		Psest_3364	0.78	-0.2
3,534,010	+		Psest_3364	0.78	+0.1
3,534,011	-		Psest_3364	0.78	+1.1
3,534,011	-		Psest_3364	0.78	+0.8
3,534,011	-		Psest_3364	0.78	-0.7
3,534,011	-		Psest_3364	0.78	+0.8
3,534,011	-		Psest_3364	0.78	+0.9
3,534,011	-		Psest_3364	0.78	+1.3
3,534,011	-		Psest_3364	0.78	-0.1
3,534,055	+		Psest_3364	0.81	-0.8
3,534,055	+		Psest_3364	0.81	+0.9
3,534,056	-		Psest_3364	0.82	+0.0
3,534,056	-		Psest_3364	0.82	+1.9
3,534,153	-		Psest_3364	0.89	+0.8
3,534,333	+				-0.2
3,534,472	+		Psest_3365	0.35	+0.4
3,534,525	+		Psest_3365	0.46	+0.4
3,534,591	+		Psest_3365	0.61	+0.6
3,534,592	-		Psest_3365	0.61	+0.1
3,534,592	-		Psest_3365	0.61	+0.8
3,534,592	-		Psest_3365	0.61	-1.0
3,534,703	+		Psest_3365	0.85	-1.5
3,534,712	+		Psest_3365	0.87	+1.1
3,534,712	+		Psest_3365	0.87	-0.1
3,534,713	-		Psest_3365	0.87	+0.8
3,534,800	-				-0.0
3,534,838	+				-0.1
3,534,838	+				+0.1
3,534,839	-				-0.8
3,534,839	-				+2.6
3,534,890	-				+0.5
3,534,890	-				+0.0
3,534,892	+				-0.5
3,534,892	+				-0.4
3,534,892	+				-0.3
3,534,892	+				-0.0
3,534,892	+				+0.3
3,534,892	+				+0.0
3,534,893	-				-0.5
3,534,893	-				+0.1
3,534,893	-				+1.3
3,534,893	-				-1.0
3,534,893	-				-0.2
3,534,893	-				-1.0
3,534,973	+				+0.4
3,534,973	+				+0.3
3,534,973	+				-0.1
3,534,974	-				+0.3
3,534,974	-				+1.3
3,534,974	-				+1.0
3,534,976	+				+0.3
3,534,976	+				+0.3
3,534,976	+				-0.1
3,534,976	+				-0.6
3,534,976	+				-0.5
3,534,977	-				+0.4
3,534,977	-				-1.0
3,534,977	-				-1.0
3,534,977	-				-1.2
3,535,087	+		Psest_3366	0.16	-0.1
3,535,087	+		Psest_3366	0.16	-1.2
3,535,087	+		Psest_3366	0.16	-0.2
3,535,088	-		Psest_3366	0.16	+1.8
3,535,088	-		Psest_3366	0.16	+0.9
3,535,088	-		Psest_3366	0.16	+0.9
3,535,150	+		Psest_3366	0.19	+0.6
3,535,150	+		Psest_3366	0.19	+0.1
3,535,150	+		Psest_3366	0.19	+0.8
3,535,151	-		Psest_3366	0.19	+0.2
3,535,151	-		Psest_3366	0.19	-0.2
3,535,306	+		Psest_3366	0.27	-0.2
3,535,306	+		Psest_3366	0.27	-1.2
3,535,306	+		Psest_3366	0.27	+0.2
3,535,306	+		Psest_3366	0.27	-0.7
3,535,306	+		Psest_3366	0.27	-1.6
3,535,306	+		Psest_3366	0.27	+0.3
3,535,306	+		Psest_3366	0.27	-0.2
3,535,306	+		Psest_3366	0.27	+0.4
3,535,306	+		Psest_3366	0.27	+0.4
3,535,306	+		Psest_3366	0.27	+0.7
3,535,306	+		Psest_3366	0.27	+0.9
3,535,306	+		Psest_3366	0.27	+0.7
3,535,306	+		Psest_3366	0.27	-0.1
3,535,306	+		Psest_3366	0.27	-0.2
3,535,306	+		Psest_3366	0.27	+0.9
3,535,306	+		Psest_3366	0.27	-0.3
3,535,306	+		Psest_3366	0.27	-0.2
3,535,307	-		Psest_3366	0.27	-1.2
3,535,307	-		Psest_3366	0.27	+1.3
3,535,307	-		Psest_3366	0.27	+0.3
3,535,307	-		Psest_3366	0.27	+1.3
3,535,307	-		Psest_3366	0.27	+0.5
3,535,307	-		Psest_3366	0.27	+1.8
3,535,307	-		Psest_3366	0.27	-0.7
3,535,307	-		Psest_3366	0.27	-0.1
3,535,307	-		Psest_3366	0.27	+0.2
3,535,307	-		Psest_3366	0.27	+0.0
3,535,307	-		Psest_3366	0.27	+0.8
3,535,307	-		Psest_3366	0.27	+0.5
3,535,307	-		Psest_3366	0.27	+0.9
3,535,307	-		Psest_3366	0.27	+0.8
3,535,307	-		Psest_3366	0.27	+0.3
3,535,307	-		Psest_3366	0.27	-1.8
3,535,307	-		Psest_3366	0.27	-0.1
3,535,307	-		Psest_3366	0.27	+0.2
3,535,307	-		Psest_3366	0.27	+0.2