Experiment: Def Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3479 and Psest_3480 overlap by 4 nucleotides Psest_3480 and Psest_3481 are separated by 243 nucleotides
Psest_3479: Psest_3479 - molybdenum cofactor synthesis domain, at 3,648,205 to 3,649,437
_3479
Psest_3480: Psest_3480 - molybdenum cofactor biosynthesis protein B, proteobacterial, at 3,649,434 to 3,649,979
_3480
Psest_3481: Psest_3481 - molybdenum cofactor biosynthesis protein A, bacterial, at 3,650,223 to 3,651,212
_3481
Position (kb)
3649
3650 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3648.806 kb on + strand, within Psest_3479 at 3648.821 kb on + strand, within Psest_3479 at 3648.821 kb on + strand, within Psest_3479 at 3648.822 kb on - strand, within Psest_3479 at 3648.822 kb on - strand, within Psest_3479 at 3648.822 kb on - strand, within Psest_3479 at 3649.053 kb on + strand, within Psest_3479 at 3649.054 kb on - strand, within Psest_3479 at 3649.817 kb on + strand, within Psest_3480 at 3649.817 kb on + strand, within Psest_3480 at 3649.896 kb on - strand, within Psest_3480 at 3649.896 kb on - strand, within Psest_3480 at 3650.053 kb on + strand at 3650.053 kb on + strand at 3650.053 kb on + strand at 3650.053 kb on + strand at 3650.054 kb on - strand at 3650.054 kb on - strand at 3650.054 kb on - strand at 3650.054 kb on - strand at 3650.054 kb on - strand at 3650.054 kb on - strand at 3650.054 kb on - strand at 3650.054 kb on - strand at 3650.054 kb on - strand at 3650.179 kb on + strand at 3650.515 kb on + strand, within Psest_3481 at 3650.515 kb on + strand, within Psest_3481 at 3650.516 kb on - strand, within Psest_3481 at 3650.583 kb on + strand, within Psest_3481 at 3650.584 kb on - strand, within Psest_3481 at 3650.584 kb on - strand, within Psest_3481 at 3650.584 kb on - strand, within Psest_3481 at 3650.584 kb on - strand, within Psest_3481 at 3650.584 kb on - strand, within Psest_3481 at 3650.584 kb on - strand, within Psest_3481 at 3650.584 kb on - strand, within Psest_3481 at 3650.584 kb on - strand, within Psest_3481 at 3650.584 kb on - strand, within Psest_3481 at 3650.584 kb on - strand, within Psest_3481
Per-strain Table
Position Strand Gene LocusTag Fraction Def Dimethyl Sulfoxide 5 vol% remove 3,648,806 + Psest_3479 0.49 +2.8 3,648,821 + Psest_3479 0.50 -0.2 3,648,821 + Psest_3479 0.50 -0.8 3,648,822 - Psest_3479 0.50 -1.0 3,648,822 - Psest_3479 0.50 +1.8 3,648,822 - Psest_3479 0.50 -0.1 3,649,053 + Psest_3479 0.69 +0.8 3,649,054 - Psest_3479 0.69 +0.2 3,649,817 + Psest_3480 0.70 -1.0 3,649,817 + Psest_3480 0.70 -0.5 3,649,896 - Psest_3480 0.85 +0.8 3,649,896 - Psest_3480 0.85 +3.4 3,650,053 + -0.1 3,650,053 + +1.5 3,650,053 + +0.9 3,650,053 + -0.8 3,650,054 - +0.2 3,650,054 - +1.4 3,650,054 - +0.8 3,650,054 - -0.5 3,650,054 - -0.3 3,650,054 - +1.2 3,650,054 - -0.1 3,650,054 - +0.2 3,650,054 - +0.8 3,650,179 + +0.8 3,650,515 + Psest_3481 0.29 +0.0 3,650,515 + Psest_3481 0.29 +0.8 3,650,516 - Psest_3481 0.30 +1.6 3,650,583 + Psest_3481 0.36 +0.3 3,650,584 - Psest_3481 0.36 -0.5 3,650,584 - Psest_3481 0.36 -2.1 3,650,584 - Psest_3481 0.36 +0.4 3,650,584 - Psest_3481 0.36 +3.8 3,650,584 - Psest_3481 0.36 -0.4 3,650,584 - Psest_3481 0.36 -1.2 3,650,584 - Psest_3481 0.36 +0.8 3,650,584 - Psest_3481 0.36 +0.5 3,650,584 - Psest_3481 0.36 +0.6 3,650,584 - Psest_3481 0.36 +0.2
Or see this region's nucleotide sequence