Experiment: Def Fusidic 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0686 and Psest_0687 are separated by 283 nucleotides Psest_0687 and Psest_0688 are separated by 89 nucleotides
Psest_0686: Psest_0686 - Membrane protease subunits, stomatin/prohibitin homologs, at 749,591 to 750,457
_0686
Psest_0687: Psest_0687 - ATP phosphoribosyltransferase, regulatory subunit, at 750,741 to 751,928
_0687
Psest_0688: Psest_0688 - adenylosuccinate synthase, at 752,018 to 753,313
_0688
Position (kb) 750
751
752 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 750.455 kb on + strand at 750.593 kb on + strand at 750.657 kb on + strand at 750.657 kb on + strand at 750.657 kb on + strand at 750.824 kb on + strand at 750.824 kb on + strand at 750.824 kb on + strand at 750.824 kb on + strand at 750.935 kb on + strand, within Psest_0687 at 751.022 kb on + strand, within Psest_0687 at 751.022 kb on + strand, within Psest_0687 at 751.022 kb on + strand, within Psest_0687 at 751.022 kb on + strand, within Psest_0687 at 751.022 kb on + strand, within Psest_0687 at 751.022 kb on + strand, within Psest_0687 at 751.373 kb on + strand, within Psest_0687 at 751.373 kb on + strand, within Psest_0687 at 751.373 kb on + strand, within Psest_0687 at 751.373 kb on + strand, within Psest_0687 at 751.373 kb on + strand, within Psest_0687 at 751.374 kb on - strand, within Psest_0687 at 751.374 kb on - strand, within Psest_0687 at 751.374 kb on - strand, within Psest_0687 at 751.374 kb on - strand, within Psest_0687 at 751.374 kb on - strand, within Psest_0687 at 751.374 kb on - strand, within Psest_0687 at 751.374 kb on - strand, within Psest_0687 at 751.374 kb on - strand, within Psest_0687 at 751.378 kb on + strand, within Psest_0687 at 751.378 kb on + strand, within Psest_0687 at 751.378 kb on + strand, within Psest_0687 at 751.378 kb on + strand, within Psest_0687 at 751.378 kb on + strand, within Psest_0687 at 751.378 kb on + strand, within Psest_0687 at 751.378 kb on + strand, within Psest_0687 at 751.530 kb on + strand, within Psest_0687 at 751.530 kb on + strand, within Psest_0687 at 751.530 kb on + strand, within Psest_0687 at 751.557 kb on + strand, within Psest_0687 at 751.568 kb on + strand, within Psest_0687 at 751.568 kb on + strand, within Psest_0687 at 751.588 kb on + strand, within Psest_0687 at 751.588 kb on + strand, within Psest_0687 at 751.632 kb on + strand, within Psest_0687 at 751.892 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Fusidic 0.032 mg/ml remove 750,455 + +0.7 750,593 + +0.7 750,657 + +0.5 750,657 + +0.1 750,657 + -0.2 750,824 + -2.1 750,824 + -4.0 750,824 + -3.2 750,824 + -1.8 750,935 + Psest_0687 0.16 -0.6 751,022 + Psest_0687 0.24 -0.9 751,022 + Psest_0687 0.24 -3.0 751,022 + Psest_0687 0.24 -2.0 751,022 + Psest_0687 0.24 -0.9 751,022 + Psest_0687 0.24 -4.0 751,022 + Psest_0687 0.24 -3.8 751,373 + Psest_0687 0.53 -3.8 751,373 + Psest_0687 0.53 -1.5 751,373 + Psest_0687 0.53 -1.8 751,373 + Psest_0687 0.53 -1.6 751,373 + Psest_0687 0.53 -3.0 751,374 - Psest_0687 0.53 -1.9 751,374 - Psest_0687 0.53 +0.1 751,374 - Psest_0687 0.53 -1.6 751,374 - Psest_0687 0.53 -2.1 751,374 - Psest_0687 0.53 -3.9 751,374 - Psest_0687 0.53 -1.1 751,374 - Psest_0687 0.53 -2.0 751,374 - Psest_0687 0.53 -1.4 751,378 + Psest_0687 0.54 -2.0 751,378 + Psest_0687 0.54 -3.5 751,378 + Psest_0687 0.54 -4.3 751,378 + Psest_0687 0.54 -4.5 751,378 + Psest_0687 0.54 -3.2 751,378 + Psest_0687 0.54 -1.9 751,378 + Psest_0687 0.54 -1.8 751,530 + Psest_0687 0.66 -2.6 751,530 + Psest_0687 0.66 -2.6 751,530 + Psest_0687 0.66 -2.0 751,557 + Psest_0687 0.69 -1.5 751,568 + Psest_0687 0.70 -0.8 751,568 + Psest_0687 0.70 -1.1 751,588 + Psest_0687 0.71 -3.8 751,588 + Psest_0687 0.71 -3.1 751,632 + Psest_0687 0.75 -1.3 751,892 + -2.6
Or see this region's nucleotide sequence