Experiment: Def Fusidic 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0242 and Psest_0243 overlap by 1 nucleotides Psest_0243 and Psest_0244 are separated by 107 nucleotides Psest_0244 and Psest_0245 are separated by 105 nucleotides
Psest_0242: Psest_0242 - gamma-glutamyltranspeptidase, at 252,880 to 254,613
_0242
Psest_0243: Psest_0243 - hypothetical protein, at 254,613 to 254,864
_0243
Psest_0244: Psest_0244 - pantetheine-phosphate adenylyltransferase, bacterial, at 254,972 to 255,454
_0244
Psest_0245: Psest_0245 - Choline dehydrogenase and related flavoproteins, at 255,560 to 257,155
_0245
Position (kb) 254
255 Strain fitness (log2 ratio) -2
-1
0
1
2 at 253.838 kb on + strand, within Psest_0242 at 253.838 kb on + strand, within Psest_0242 at 253.891 kb on + strand, within Psest_0242 at 253.891 kb on + strand, within Psest_0242 at 253.891 kb on + strand, within Psest_0242 at 253.891 kb on + strand, within Psest_0242 at 253.892 kb on - strand, within Psest_0242 at 253.892 kb on - strand, within Psest_0242 at 253.892 kb on - strand, within Psest_0242 at 254.264 kb on + strand, within Psest_0242 at 254.264 kb on + strand, within Psest_0242 at 254.264 kb on + strand, within Psest_0242 at 254.264 kb on + strand, within Psest_0242 at 254.264 kb on + strand, within Psest_0242 at 254.264 kb on + strand, within Psest_0242 at 254.264 kb on + strand, within Psest_0242 at 254.264 kb on + strand, within Psest_0242 at 254.265 kb on - strand, within Psest_0242 at 254.265 kb on - strand, within Psest_0242 at 254.265 kb on - strand, within Psest_0242 at 254.265 kb on - strand, within Psest_0242 at 254.265 kb on - strand, within Psest_0242 at 254.265 kb on - strand, within Psest_0242 at 254.265 kb on - strand, within Psest_0242 at 254.265 kb on - strand, within Psest_0242 at 254.265 kb on - strand, within Psest_0242 at 254.265 kb on - strand, within Psest_0242 at 254.638 kb on + strand at 254.638 kb on + strand at 254.639 kb on - strand, within Psest_0243 at 254.639 kb on - strand, within Psest_0243 at 254.906 kb on - strand at 254.906 kb on - strand at 254.909 kb on - strand at 254.909 kb on - strand at 255.615 kb on + strand at 255.671 kb on + strand at 255.836 kb on - strand, within Psest_0245 at 255.836 kb on - strand, within Psest_0245 at 255.836 kb on - strand, within Psest_0245 at 255.836 kb on - strand, within Psest_0245 at 255.839 kb on + strand, within Psest_0245 at 255.839 kb on + strand, within Psest_0245 at 255.839 kb on + strand, within Psest_0245 at 255.839 kb on + strand, within Psest_0245 at 255.839 kb on + strand, within Psest_0245 at 255.839 kb on + strand, within Psest_0245 at 255.839 kb on + strand, within Psest_0245 at 255.839 kb on + strand, within Psest_0245 at 255.839 kb on + strand, within Psest_0245 at 255.839 kb on + strand, within Psest_0245 at 255.839 kb on + strand, within Psest_0245 at 255.839 kb on + strand, within Psest_0245 at 255.840 kb on - strand, within Psest_0245 at 255.840 kb on - strand, within Psest_0245 at 255.840 kb on - strand, within Psest_0245 at 255.840 kb on - strand, within Psest_0245 at 255.840 kb on - strand, within Psest_0245 at 255.840 kb on - strand, within Psest_0245 at 255.840 kb on - strand, within Psest_0245
Per-strain Table
Position Strand Gene LocusTag Fraction Def Fusidic 0.032 mg/ml remove 253,838 + Psest_0242 0.55 +0.6 253,838 + Psest_0242 0.55 +0.4 253,891 + Psest_0242 0.58 +0.9 253,891 + Psest_0242 0.58 +0.9 253,891 + Psest_0242 0.58 +1.1 253,891 + Psest_0242 0.58 -0.5 253,892 - Psest_0242 0.58 +1.5 253,892 - Psest_0242 0.58 +0.3 253,892 - Psest_0242 0.58 +1.6 254,264 + Psest_0242 0.80 +0.3 254,264 + Psest_0242 0.80 -0.1 254,264 + Psest_0242 0.80 +0.4 254,264 + Psest_0242 0.80 -0.9 254,264 + Psest_0242 0.80 +0.3 254,264 + Psest_0242 0.80 -0.1 254,264 + Psest_0242 0.80 +0.9 254,264 + Psest_0242 0.80 +0.3 254,265 - Psest_0242 0.80 +1.9 254,265 - Psest_0242 0.80 +0.2 254,265 - Psest_0242 0.80 -1.8 254,265 - Psest_0242 0.80 -1.1 254,265 - Psest_0242 0.80 +0.9 254,265 - Psest_0242 0.80 +1.1 254,265 - Psest_0242 0.80 -0.1 254,265 - Psest_0242 0.80 +1.0 254,265 - Psest_0242 0.80 +0.4 254,265 - Psest_0242 0.80 -1.1 254,638 + -0.4 254,638 + +0.5 254,639 - Psest_0243 0.10 -0.6 254,639 - Psest_0243 0.10 +0.3 254,906 - +0.1 254,906 - +1.0 254,909 - +1.4 254,909 - +0.9 255,615 + -0.3 255,671 + +1.0 255,836 - Psest_0245 0.17 -0.1 255,836 - Psest_0245 0.17 +0.6 255,836 - Psest_0245 0.17 +0.6 255,836 - Psest_0245 0.17 +0.3 255,839 + Psest_0245 0.17 +0.4 255,839 + Psest_0245 0.17 -1.6 255,839 + Psest_0245 0.17 -0.8 255,839 + Psest_0245 0.17 +1.0 255,839 + Psest_0245 0.17 -0.1 255,839 + Psest_0245 0.17 +0.4 255,839 + Psest_0245 0.17 -0.9 255,839 + Psest_0245 0.17 +0.5 255,839 + Psest_0245 0.17 -0.7 255,839 + Psest_0245 0.17 -0.2 255,839 + Psest_0245 0.17 -0.6 255,839 + Psest_0245 0.17 +1.2 255,840 - Psest_0245 0.18 +0.7 255,840 - Psest_0245 0.18 -0.3 255,840 - Psest_0245 0.18 -0.1 255,840 - Psest_0245 0.18 -0.4 255,840 - Psest_0245 0.18 +1.5 255,840 - Psest_0245 0.18 +1.1 255,840 - Psest_0245 0.18 +0.7
Or see this region's nucleotide sequence