Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1008

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
1,092,166	-				+0.2
1,092,316	-		Psest_1007	0.22	-0.9
1,092,316	-		Psest_1007	0.22	+0.5
1,092,316	-		Psest_1007	0.22	+0.5
1,092,416	+		Psest_1007	0.34	+1.1
1,092,416	+		Psest_1007	0.34	+0.8
1,092,416	+		Psest_1007	0.34	+0.3
1,092,474	+		Psest_1007	0.40	-0.5
1,092,474	+		Psest_1007	0.40	+0.1
1,092,474	+		Psest_1007	0.40	+0.1
1,092,474	+		Psest_1007	0.40	+0.7
1,092,474	+		Psest_1007	0.40	-0.0
1,092,475	-		Psest_1007	0.40	-0.2
1,092,531	+		Psest_1007	0.46	-1.1
1,092,531	+		Psest_1007	0.46	+0.2
1,092,532	-		Psest_1007	0.46	-0.8
1,092,532	-		Psest_1007	0.46	-1.1
1,092,532	-		Psest_1007	0.46	+0.7
1,092,532	-		Psest_1007	0.46	+0.1
1,092,532	-		Psest_1007	0.46	-1.3
1,092,532	-		Psest_1007	0.46	+1.7
1,092,532	-		Psest_1007	0.46	+1.5
1,092,532	-		Psest_1007	0.46	+0.1
1,092,559	+		Psest_1007	0.49	+0.5
1,092,559	+		Psest_1007	0.49	+0.7
1,092,559	+		Psest_1007	0.49	-1.1
1,092,560	-		Psest_1007	0.50	-0.3
1,092,560	-		Psest_1007	0.50	-0.1
1,093,023	-				+0.1
1,093,023	-				+0.8
1,093,023	-				+0.2
1,093,198	-		Psest_1008	0.88	-0.8
1,094,126	-				+0.0