Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0886

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
962,557	+				-1.0
962,557	+				-0.7
962,557	+				-0.8
962,557	+				-0.2
962,558	-				+0.7
962,558	-				-1.1
962,558	-				-1.0
962,558	-				-0.2
962,558	-				-1.1
962,558	-				+0.2
962,558	-				-0.3
962,558	-				-0.3
962,559	+				+0.4
962,559	+				-0.5
962,566	+				+0.5
962,631	+				+0.5
962,690	+				+0.1
962,690	+				-0.1
962,694	+				-1.7
962,694	+				+1.0
962,694	+				+0.4
962,694	+				+0.1
962,694	+				+0.2
962,694	+				-0.6
962,695	-				+1.7
962,695	-				+0.4
962,695	-				+0.6
962,695	-				-1.1
962,695	-				+0.5
962,695	-				+0.2
962,717	+				+0.5
962,737	+				+0.1
962,738	-				-0.8
962,738	-				-0.5
962,873	+				-1.2
962,874	-				+0.3
962,952	+				+0.5
962,977	+				+0.2
962,977	+				+0.4
962,977	+				-0.1
962,978	-				+0.5
962,978	-				+0.7
962,978	-				+0.5
963,019	-				-0.1
963,019	-				-0.1
963,380	+				-0.8
963,380	+				-0.2
963,380	+				+0.1
963,381	-				-0.3
963,433	+				-0.3
963,434	-				+0.2
963,434	-				+0.1
963,434	-				-0.3
963,434	-				-1.8
963,434	-				+0.5
963,434	-				+0.1
963,457	-				+0.0
963,797	+		Psest_0886	0.35	-1.1
964,065	-		Psest_0886	0.61	-1.7
964,067	+		Psest_0886	0.62	+0.6
964,067	+		Psest_0886	0.62	-0.0
964,067	+		Psest_0886	0.62	+1.3
964,067	+		Psest_0886	0.62	-1.6
964,068	-		Psest_0886	0.62	-1.7
964,075	+		Psest_0886	0.62	-0.5
964,076	-		Psest_0886	0.63	-0.5
964,289	-		Psest_0886	0.84	-1.1
964,289	-		Psest_0886	0.84	-0.8
964,472	+				+0.4
964,472	+				+0.3
964,472	+				-0.7
964,472	+				-1.1
964,472	+				-0.3
964,472	+				-1.8
964,473	-				+0.1
964,473	-				+0.3
964,473	-				-0.3
964,473	-				-0.1
964,473	-				+1.1
964,473	-				+0.7
964,473	-				-1.1
964,473	-				-0.1
964,473	-				-1.0
964,473	-				-0.7
964,476	+				+0.1
964,476	+				-1.0
964,476	+				+0.1
964,476	+				-0.1
964,476	+				+1.5
964,476	+				-0.6
964,476	+				-0.5
964,476	+				-0.5
964,477	-				+0.7
964,477	-				+1.4
964,477	-				-0.2
964,538	+				+0.7
964,539	-				-1.7
964,551	+				+0.6
964,552	-				+0.5
964,552	-				+2.1
964,606	+				+0.1
964,729	+				+0.1
964,729	+				-1.3
964,729	+				+0.5
964,729	+				-0.3
964,729	+				-0.1
964,729	+				+0.1
964,729	+				+0.4
964,730	-				+1.3
964,730	-				-0.8
964,730	-				+0.2
964,730	-				+1.1
964,730	-				-0.3
964,730	-				-0.8
964,730	-				+1.1
964,730	-				+0.8
964,745	+				-0.2
964,745	+				-0.3
964,745	+				-0.9
964,771	+				-1.3
964,772	-				+0.3
964,830	+				-1.2
964,837	+				-0.6
964,837	+				-0.5
964,838	-				-1.2
964,838	-				+0.7
965,045	+				+0.4
965,046	-				+0.1
965,127	+		Psest_0888	0.13	+0.0
965,128	-		Psest_0888	0.13	-1.1
965,128	-		Psest_0888	0.13	+0.6
965,431	-		Psest_0888	0.35	-1.9
965,431	-		Psest_0888	0.35	+1.7
965,431	-		Psest_0888	0.35	+0.3
965,431	-		Psest_0888	0.35	+1.3
965,431	-		Psest_0888	0.35	-0.3
965,434	-		Psest_0888	0.36	-2.2
965,434	-		Psest_0888	0.36	+0.2
965,434	-		Psest_0888	0.36	-0.6
965,434	-		Psest_0888	0.36	-2.1
965,434	-		Psest_0888	0.36	-0.6
965,434	-		Psest_0888	0.36	-2.1