Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3806

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
3,975,783	+				-1.1
3,975,784	-				-1.6
3,975,784	-				-0.1
3,975,848	+				-2.2
3,975,849	-				-0.1
3,975,849	-				-0.3
3,975,906	-				-1.2
3,976,190	+		Psest_3806	0.15	-0.8
3,976,190	+		Psest_3806	0.15	-0.8
3,976,190	+		Psest_3806	0.15	-0.5
3,976,190	+		Psest_3806	0.15	-0.8
3,976,190	+		Psest_3806	0.15	-1.6
3,976,191	-		Psest_3806	0.15	-0.6
3,976,191	-		Psest_3806	0.15	-0.4
3,976,191	-		Psest_3806	0.15	-0.4
3,976,234	-		Psest_3806	0.16	+0.1
3,976,234	-		Psest_3806	0.16	-0.1
3,976,256	+		Psest_3806	0.17	+0.2
3,976,257	-		Psest_3806	0.17	-1.4
3,976,257	-		Psest_3806	0.17	-0.1
3,976,298	-		Psest_3806	0.19	-1.5
3,976,324	+		Psest_3806	0.20	-1.6
3,976,325	-		Psest_3806	0.20	-0.8
3,976,325	-		Psest_3806	0.20	+1.2
3,976,564	+		Psest_3806	0.29	-0.4
3,976,565	-		Psest_3806	0.29	-1.6
3,976,565	-		Psest_3806	0.29	+2.0
3,976,703	+		Psest_3806	0.35	-0.4
3,976,703	+		Psest_3806	0.35	+0.1
3,976,703	+		Psest_3806	0.35	+0.5
3,976,703	+		Psest_3806	0.35	-0.4
3,976,704	-		Psest_3806	0.35	-1.4
3,976,704	-		Psest_3806	0.35	+0.2
3,976,704	-		Psest_3806	0.35	-0.5
3,976,704	-		Psest_3806	0.35	-1.4
3,976,704	-		Psest_3806	0.35	-1.6
3,976,704	-		Psest_3806	0.35	-0.8
3,976,704	-		Psest_3806	0.35	-1.4
3,976,758	-		Psest_3806	0.37	-0.2
3,976,891	+		Psest_3806	0.42	-1.0
3,976,891	+		Psest_3806	0.42	-0.7
3,978,440	+				-2.5
3,979,344	-				-0.9