Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3118

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
3,294,900	+		Psest_3116	0.76	-0.7
3,294,900	+		Psest_3116	0.76	+0.1
3,294,901	-		Psest_3116	0.76	+1.4
3,295,364	+		Psest_3117	0.39	+0.7
3,295,365	-		Psest_3117	0.39	+0.7
3,295,365	-		Psest_3117	0.39	-0.1
3,295,365	-		Psest_3117	0.39	+0.4
3,295,365	-		Psest_3117	0.39	+1.0
3,295,373	+		Psest_3117	0.40	+1.5
3,295,374	-		Psest_3117	0.40	+1.3
3,295,519	-		Psest_3117	0.61	+2.5
3,295,519	-		Psest_3117	0.61	+0.3
3,295,628	+		Psest_3117	0.76	+2.8
3,295,628	+		Psest_3117	0.76	+1.6
3,295,628	+		Psest_3117	0.76	+1.0
3,295,629	-		Psest_3117	0.76	+1.0
3,295,884	+		Psest_3118	0.12	+0.6
3,295,884	+		Psest_3118	0.12	+0.2
3,295,884	+		Psest_3118	0.12	+0.2
3,295,885	-		Psest_3118	0.12	+0.8
3,295,885	-		Psest_3118	0.12	+0.5
3,296,001	+		Psest_3118	0.30	+0.3
3,296,001	+		Psest_3118	0.30	-0.3
3,296,001	+		Psest_3118	0.30	-0.1
3,296,001	+		Psest_3118	0.30	+0.7
3,296,001	+		Psest_3118	0.30	+1.0
3,296,001	+		Psest_3118	0.30	+0.4
3,296,001	+		Psest_3118	0.30	-0.2
3,296,002	-		Psest_3118	0.30	+0.2
3,296,002	-		Psest_3118	0.30	-0.1
3,296,002	-		Psest_3118	0.30	+0.5
3,296,002	-		Psest_3118	0.30	+2.2
3,296,002	-		Psest_3118	0.30	+0.3
3,296,002	-		Psest_3118	0.30	+0.6
3,296,002	-		Psest_3118	0.30	-0.5
3,296,002	-		Psest_3118	0.30	+0.6
3,296,002	-		Psest_3118	0.30	+0.1
3,296,031	+		Psest_3118	0.35	+1.1
3,296,031	+		Psest_3118	0.35	-0.0
3,296,031	+		Psest_3118	0.35	-0.2
3,296,032	-		Psest_3118	0.35	-0.9
3,296,032	-		Psest_3118	0.35	-1.0
3,296,319	+		Psest_3118	0.80	+1.0
3,296,320	-		Psest_3118	0.80	-0.2
3,296,320	-		Psest_3118	0.80	-0.5
3,296,320	-		Psest_3118	0.80	+0.2
3,296,320	-		Psest_3118	0.80	+1.0
3,296,361	+		Psest_3118	0.86	+0.1
3,296,362	-		Psest_3118	0.87	+0.3
3,296,421	+				+1.4
3,296,421	+				-0.4
3,296,421	+				-0.0
3,296,421	+				+0.5
3,296,421	+				+0.7
3,296,422	-				+0.5
3,296,469	-				+0.5
3,296,513	+				+0.7
3,296,513	+				+0.7
3,296,515	+				+0.4
3,296,515	+				+0.9
3,296,515	+				+1.4
3,296,516	-				+1.0
3,296,731	+				-0.3
3,296,732	-				-0.0
3,296,933	+		Psest_3120	0.37	+0.0
3,296,933	+		Psest_3120	0.37	+0.3
3,296,934	-		Psest_3120	0.37	+0.2
3,296,934	-		Psest_3120	0.37	-0.4
3,296,934	-		Psest_3120	0.37	-0.5
3,296,967	-		Psest_3120	0.46	+1.0
3,296,985	-		Psest_3120	0.50	+1.0
3,297,069	+		Psest_3120	0.72	-1.3
3,297,122	+		Psest_3120	0.85	-0.6
3,297,122	+		Psest_3120	0.85	-0.3
3,297,122	+		Psest_3120	0.85	-0.4
3,297,122	+		Psest_3120	0.85	+2.0
3,297,122	+		Psest_3120	0.85	-0.4
3,297,122	+		Psest_3120	0.85	+0.5
3,297,122	+		Psest_3120	0.85	-0.1
3,297,123	-		Psest_3120	0.85	+1.3
3,297,123	-		Psest_3120	0.85	+1.1
3,297,123	-		Psest_3120	0.85	+0.0
3,297,123	-		Psest_3120	0.85	+0.5
3,297,123	-		Psest_3120	0.85	+1.1
3,297,139	-		Psest_3120	0.89	-0.1
3,297,139	-		Psest_3120	0.89	-0.7
3,297,165	+				+0.0
3,297,226	+				-1.1
3,297,226	+				+0.1
3,297,226	+				+1.4
3,297,227	-				+0.4
3,297,227	-				+0.4
3,297,227	-				+0.5