Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2911

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
3,103,194	+		Psest_2910	0.80	-0.3
3,103,194	+		Psest_2910	0.80	-1.1
3,103,194	+		Psest_2910	0.80	-0.6
3,103,194	+		Psest_2910	0.80	+0.2
3,103,195	-		Psest_2910	0.80	-0.6
3,103,195	-		Psest_2910	0.80	-0.8
3,103,195	-		Psest_2910	0.80	-0.7
3,103,227	+		Psest_2910	0.81	+1.0
3,103,227	+		Psest_2910	0.81	-0.6
3,103,228	-		Psest_2910	0.81	+0.0
3,103,232	-		Psest_2910	0.81	-0.6
3,103,232	-		Psest_2910	0.81	-0.0
3,103,435	+				-1.6
3,103,436	-				-2.6
3,103,437	+				+0.3
3,103,437	+				+0.0
3,103,437	+				-0.6
3,103,437	+				-0.2
3,103,437	+				+1.6
3,103,437	+				+0.4
3,103,437	+				+0.6
3,103,437	+				+0.2
3,103,437	+				+0.5
3,103,437	+				-0.1
3,103,438	-				-0.4
3,103,438	-				-0.2
3,103,438	-				-0.2
3,103,438	-				-0.1
3,103,438	-				-0.5
3,103,438	-				+0.0
3,103,438	-				-1.7
3,103,438	-				+0.0
3,103,438	-				-1.0
3,103,438	-				+0.5
3,103,438	-				+0.5
3,103,438	-				+0.2
3,103,438	-				-0.8
3,103,521	-				+1.3
3,103,521	-				+0.0
3,103,635	+				-1.1
3,103,635	+				+0.2
3,103,635	+				+0.0
3,103,635	+				-0.9
3,103,636	-				+0.8
3,103,636	-				-0.4
3,103,636	-				-0.8
3,103,636	-				-2.3
3,103,638	+				+0.2
3,103,638	+				+0.8
3,103,639	-				-0.6
3,103,639	-				+0.3
3,103,639	-				-0.5
3,103,639	-				-0.6
3,103,658	+				-1.3
3,103,736	+				-1.1
3,103,736	+				-0.3
3,103,737	-				+0.5
3,103,776	+				-1.0
3,103,800	-				-0.3
3,103,804	+				-0.1
3,103,805	-				-2.3
3,103,863	+				+0.2
3,103,895	-				+0.2
3,103,896	+				+0.4
3,103,896	+				-0.1
3,103,896	+				-1.5
3,103,900	+				-0.7
3,103,900	+				-1.0
3,103,943	-				-0.6
3,104,003	+				+2.0
3,104,041	-				-0.4
3,104,049	-				+0.5
3,104,052	+				-1.2
3,104,053	-				-0.2
3,104,162	+				+0.6
3,104,163	-				-0.3
3,104,337	-		Psest_2911	0.86	+0.0
3,104,337	-		Psest_2911	0.86	-0.2
3,104,337	-		Psest_2911	0.86	-1.2
3,104,536	+		Psest_2912	0.29	+0.1
3,104,536	+		Psest_2912	0.29	-0.7
3,104,536	+		Psest_2912	0.29	+0.0
3,104,536	+		Psest_2912	0.29	+0.0
3,104,536	+		Psest_2912	0.29	+0.6
3,104,536	+		Psest_2912	0.29	-0.3
3,104,537	-		Psest_2912	0.29	-0.6
3,104,883	+		Psest_2912	0.88	-0.4
3,104,883	+		Psest_2912	0.88	+0.3
3,105,001	+				-0.7
3,105,002	-				-1.4
3,105,049	+				+0.9
3,105,050	-				-0.2
3,105,258	-		Psest_2913	0.31	-0.2
3,105,258	-		Psest_2913	0.31	+1.0
3,105,259	+		Psest_2913	0.31	-1.2
3,105,259	+		Psest_2913	0.31	+0.6
3,105,259	+		Psest_2913	0.31	-0.6
3,105,259	+		Psest_2913	0.31	-0.2
3,105,259	+		Psest_2913	0.31	-0.7
3,105,260	-		Psest_2913	0.31	+0.0
3,105,260	-		Psest_2913	0.31	-0.3
3,105,260	-		Psest_2913	0.31	-0.6