Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2626

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
2,807,649	+		Psest_2625	0.52	+1.3
2,807,649	+		Psest_2625	0.52	-1.5
2,807,650	-		Psest_2625	0.52	-0.0
2,807,650	-		Psest_2625	0.52	+1.0
2,807,650	-		Psest_2625	0.52	-0.3
2,807,890	+		Psest_2625	0.68	-0.2
2,807,890	+		Psest_2625	0.68	-1.6
2,807,891	-		Psest_2625	0.68	-0.6
2,808,127	+		Psest_2625	0.83	+1.4
2,808,127	+		Psest_2625	0.83	-0.8
2,808,128	-		Psest_2625	0.83	-0.8
2,808,128	-		Psest_2625	0.83	-0.0
2,808,226	+		Psest_2625	0.90	-0.6
2,808,226	+		Psest_2625	0.90	+0.0
2,808,226	+		Psest_2625	0.90	+1.2
2,808,226	+		Psest_2625	0.90	+1.0
2,808,227	-		Psest_2625	0.90	-0.6
2,808,227	-		Psest_2625	0.90	-0.4
2,808,227	-		Psest_2625	0.90	-1.2
2,808,354	+				-0.4
2,808,354	+				+0.2
2,808,360	+				-0.4
2,808,360	+				-0.3
2,808,360	+				+0.6
2,808,361	-				-0.2
2,808,361	-				-0.2
2,808,361	-				+0.0
2,808,361	-				+1.3
2,808,361	-				-1.1
2,808,361	-				-0.6
2,808,699	+		Psest_2626	0.33	-1.2
2,808,699	+		Psest_2626	0.33	-1.0
2,808,700	-		Psest_2626	0.33	+1.0
2,808,702	+		Psest_2626	0.33	-0.9
2,809,226	-				-0.0
2,809,226	-				+0.6
2,809,232	+				+1.6
2,809,285	+				+0.3
2,809,285	+				+0.4
2,809,285	+				-0.6
2,809,286	-				+0.5
2,809,501	+		Psest_2627	0.18	+1.8
2,809,502	-		Psest_2627	0.19	-2.0
2,809,780	+		Psest_2627	0.40	-0.1
2,809,780	+		Psest_2627	0.40	-1.5
2,809,896	+		Psest_2627	0.48	-0.9
2,809,897	-		Psest_2627	0.48	-0.3
2,809,897	-		Psest_2627	0.48	-0.6
2,809,948	+		Psest_2627	0.52	-1.6
2,810,035	+		Psest_2627	0.59	+1.0
2,810,035	+		Psest_2627	0.59	-0.9
2,810,036	-		Psest_2627	0.59	-1.0
2,810,036	-		Psest_2627	0.59	-0.3
2,810,036	-		Psest_2627	0.59	-0.6
2,810,036	-		Psest_2627	0.59	-2.6
2,810,036	-		Psest_2627	0.59	+1.0
2,810,036	-		Psest_2627	0.59	-0.0
2,810,062	+		Psest_2627	0.61	+1.2
2,810,062	+		Psest_2627	0.61	-0.8
2,810,062	+		Psest_2627	0.61	-0.6
2,810,062	+		Psest_2627	0.61	+0.4
2,810,062	+		Psest_2627	0.61	+1.3
2,810,063	-		Psest_2627	0.61	+0.5
2,810,063	-		Psest_2627	0.61	-0.5
2,810,063	-		Psest_2627	0.61	-0.4
2,810,063	-		Psest_2627	0.61	-1.0
2,810,063	-		Psest_2627	0.61	-0.0
2,810,140	+		Psest_2627	0.67	-0.6
2,810,243	-		Psest_2627	0.75	+0.3