Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2411

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
2,567,141	+		Psest_2410	0.60	-0.1
2,567,153	+		Psest_2410	0.61	+1.0
2,567,154	-		Psest_2410	0.61	-0.2
2,567,663	+		Psest_2410	0.87	+0.6
2,567,663	+		Psest_2410	0.87	-0.0
2,567,663	+		Psest_2410	0.87	+1.0
2,567,664	-		Psest_2410	0.87	-1.0
2,567,664	-		Psest_2410	0.87	+1.4
2,567,853	+				+1.2
2,567,854	-				+1.0
2,568,170	+				-1.4
2,568,170	+				-1.6
2,568,170	+				+1.0
2,568,170	+				-0.8
2,568,170	+				-0.4
2,568,170	+				-0.6
2,568,170	+				+0.6
2,568,170	+				-1.0
2,568,170	+				+2.6
2,568,171	-				-0.7
2,568,171	-				-0.3
2,568,171	-				-0.0
2,568,171	-				-2.0
2,568,171	-				-1.6
2,568,171	-				-1.2
2,568,171	-				-1.6
2,568,171	-				+0.4
2,568,171	-				-1.0
2,568,171	-				-0.6
2,568,171	-				-0.6
2,568,171	-				-1.1
2,568,171	-				-0.8
2,568,171	-				-0.4
2,568,171	-				+0.6
2,568,171	-				-2.6
2,568,171	-				-0.8
2,568,171	-				-0.4
2,568,343	+				-1.5
2,568,343	+				-1.5
2,568,343	+				+1.0
2,568,343	+				+0.8
2,568,742	+		Psest_2411	0.21	+1.0
2,568,743	-		Psest_2411	0.21	-0.8
2,568,995	-		Psest_2411	0.29	-0.9
2,569,165	+		Psest_2411	0.35	-0.6
2,569,166	-		Psest_2411	0.35	-1.2
2,569,290	-		Psest_2411	0.39	-1.6
2,569,400	+		Psest_2411	0.43	-2.0
2,569,400	+		Psest_2411	0.43	+1.0
2,569,513	-		Psest_2411	0.46	-0.4
2,569,658	-		Psest_2411	0.51	-0.7
2,569,658	-		Psest_2411	0.51	-0.2
2,569,658	-		Psest_2411	0.51	-0.0
2,569,658	-		Psest_2411	0.51	-0.0
2,569,693	+		Psest_2411	0.52	+0.7
2,569,856	+		Psest_2411	0.58	-0.9
2,569,856	+		Psest_2411	0.58	+0.3
2,569,857	-		Psest_2411	0.58	-1.0
2,570,291	+		Psest_2411	0.72	+0.4
2,570,291	+		Psest_2411	0.72	+2.0
2,570,291	+		Psest_2411	0.72	-0.3
2,570,291	+		Psest_2411	0.72	-1.6
2,570,291	+		Psest_2411	0.72	-1.7
2,571,307	+				-1.4
2,571,336	-				+0.6
2,571,351	-				-1.6
2,571,351	-				-0.0
2,571,723	+		Psest_2412	0.28	+1.0
2,571,723	+		Psest_2412	0.28	+0.2
2,571,723	+		Psest_2412	0.28	+0.7
2,571,723	+		Psest_2412	0.28	-1.6
2,571,724	-		Psest_2412	0.29	+2.0
2,571,921	+		Psest_2412	0.39	+1.0
2,571,921	+		Psest_2412	0.39	+1.0
2,571,921	+		Psest_2412	0.39	-0.9
2,571,921	+		Psest_2412	0.39	-0.2
2,571,921	+		Psest_2412	0.39	-1.0
2,571,921	+		Psest_2412	0.39	+0.4
2,571,922	-		Psest_2412	0.39	-0.6
2,571,922	-		Psest_2412	0.39	-0.3
2,571,922	-		Psest_2412	0.39	-0.0
2,571,922	-		Psest_2412	0.39	+1.0
2,571,922	-		Psest_2412	0.39	+1.0
2,571,922	-		Psest_2412	0.39	+2.0
2,571,922	-		Psest_2412	0.39	-1.5
2,571,922	-		Psest_2412	0.39	+0.4
2,571,999	+		Psest_2412	0.43	-0.5
2,572,000	-		Psest_2412	0.43	-1.6
2,572,000	-		Psest_2412	0.43	+1.3
2,572,005	+		Psest_2412	0.43	-0.0
2,572,005	+		Psest_2412	0.43	-0.0
2,572,005	+		Psest_2412	0.43	+1.0
2,572,005	+		Psest_2412	0.43	-0.0
2,572,005	+		Psest_2412	0.43	+1.3
2,572,006	-		Psest_2412	0.43	+0.1
2,572,006	-		Psest_2412	0.43	-0.3
2,572,006	-		Psest_2412	0.43	-1.6
2,572,006	-		Psest_2412	0.43	-0.6
2,572,006	-		Psest_2412	0.43	-0.0
2,572,006	-		Psest_2412	0.43	+1.6
2,572,006	-		Psest_2412	0.43	-0.0
2,572,032	+		Psest_2412	0.44	-0.0
2,572,033	-		Psest_2412	0.44	+0.0
2,572,033	-		Psest_2412	0.44	+1.7