Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2379

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
2,528,126	+		Psest_2378	0.16	+0.2
2,528,126	+		Psest_2378	0.16	-0.0
2,528,126	+		Psest_2378	0.16	-1.5
2,528,126	+		Psest_2378	0.16	+0.2
2,528,126	+		Psest_2378	0.16	-1.0
2,528,126	+		Psest_2378	0.16	-0.6
2,528,126	+		Psest_2378	0.16	-1.1
2,528,126	+		Psest_2378	0.16	-2.0
2,528,127	-		Psest_2378	0.16	-1.0
2,528,127	-		Psest_2378	0.16	-0.3
2,528,127	-		Psest_2378	0.16	+0.3
2,528,295	-		Psest_2378	0.33	+1.4
2,528,309	+		Psest_2378	0.34	-0.2
2,528,312	-		Psest_2378	0.34	+0.4
2,528,312	-		Psest_2378	0.34	-1.0
2,528,331	-		Psest_2378	0.36	-2.4
2,528,532	+		Psest_2378	0.56	-1.0
2,528,533	-		Psest_2378	0.56	-0.0
2,528,533	-		Psest_2378	0.56	-0.1
2,528,534	+		Psest_2378	0.56	+0.6
2,528,567	+		Psest_2378	0.59	-1.4
2,528,568	-		Psest_2378	0.60	-2.0
2,528,636	+		Psest_2378	0.66	-0.2
2,528,652	-		Psest_2378	0.68	-1.6
2,528,708	+		Psest_2378	0.73	+0.1
2,528,708	+		Psest_2378	0.73	+0.2
2,528,709	-		Psest_2378	0.73	+0.4
2,528,709	-		Psest_2378	0.73	-0.0
2,528,709	-		Psest_2378	0.73	+0.4
2,528,709	-		Psest_2378	0.73	-0.2
2,528,783	+		Psest_2378	0.81	-1.2
2,528,818	+		Psest_2378	0.84	+1.6
2,528,819	-		Psest_2378	0.84	+0.4
2,528,824	+		Psest_2378	0.85	-0.0
2,528,838	-		Psest_2378	0.86	+1.0
2,528,838	-		Psest_2378	0.86	+0.2
2,528,840	+		Psest_2378	0.86	+0.0
2,528,841	-		Psest_2378	0.86	-1.6
2,528,841	-		Psest_2378	0.86	-0.4
2,528,994	+				+0.3
2,529,088	+				+0.1
2,529,129	+				-0.7
2,529,130	-				+0.1
2,529,130	-				-1.0
2,529,558	-		Psest_2379	0.21	-1.4
2,529,733	+		Psest_2379	0.28	-0.5
2,529,734	-		Psest_2379	0.28	-0.4
2,529,734	-		Psest_2379	0.28	-0.6
2,529,985	+		Psest_2379	0.37	+0.1
2,530,349	+		Psest_2379	0.51	-0.0
2,530,350	-		Psest_2379	0.51	-0.9
2,530,353	+		Psest_2379	0.52	+0.2
2,530,353	+		Psest_2379	0.52	-0.5
2,530,353	+		Psest_2379	0.52	-0.6
2,530,353	+		Psest_2379	0.52	-1.4
2,530,353	+		Psest_2379	0.52	-2.0
2,530,353	+		Psest_2379	0.52	-1.0
2,530,353	+		Psest_2379	0.52	+1.6
2,530,353	+		Psest_2379	0.52	-0.0
2,530,354	-		Psest_2379	0.52	-0.9
2,530,354	-		Psest_2379	0.52	-1.1
2,530,354	-		Psest_2379	0.52	-2.4
2,530,354	-		Psest_2379	0.52	-0.0
2,530,354	-		Psest_2379	0.52	-0.7
2,530,354	-		Psest_2379	0.52	-1.4
2,530,367	-		Psest_2379	0.52	-1.1
2,530,367	-		Psest_2379	0.52	-1.7
2,530,367	-		Psest_2379	0.52	-1.2
2,530,367	-		Psest_2379	0.52	-0.0
2,530,367	-		Psest_2379	0.52	-1.0
2,530,367	-		Psest_2379	0.52	-0.7
2,530,368	+		Psest_2379	0.52	-1.6
2,530,368	+		Psest_2379	0.52	-1.9
2,530,368	+		Psest_2379	0.52	-1.5
2,530,368	+		Psest_2379	0.52	-1.7
2,530,369	-		Psest_2379	0.52	-0.6
2,530,369	-		Psest_2379	0.52	-0.3
2,530,557	+		Psest_2379	0.59	-0.5
2,530,557	+		Psest_2379	0.59	-1.4
2,530,557	+		Psest_2379	0.59	-1.6
2,530,558	-		Psest_2379	0.59	-1.7
2,530,579	-		Psest_2379	0.60	-0.3
2,531,037	+		Psest_2379	0.78	+0.6
2,531,038	-		Psest_2379	0.78	-1.5
2,531,209	+		Psest_2379	0.84	-0.4
2,531,467	-				-1.0
2,531,467	-				-1.1
2,531,467	-				-3.1
2,531,467	-				+0.1
2,531,662	+				-0.8
2,531,884	+		Psest_2380	0.26	-1.4
2,531,884	+		Psest_2380	0.26	-0.7
2,531,884	+		Psest_2380	0.26	-2.2
2,531,932	+		Psest_2380	0.30	-0.3
2,531,932	+		Psest_2380	0.30	-0.6
2,531,932	+		Psest_2380	0.30	-0.8
2,531,932	+		Psest_2380	0.30	-0.9
2,531,932	+		Psest_2380	0.30	-0.6
2,531,932	+		Psest_2380	0.30	-1.6
2,531,932	+		Psest_2380	0.30	-2.6
2,531,932	+		Psest_2380	0.30	-1.4
2,531,932	+		Psest_2380	0.30	-0.2
2,531,933	-		Psest_2380	0.31	-0.6
2,531,933	-		Psest_2380	0.31	-1.6
2,531,933	-		Psest_2380	0.31	+1.6
2,531,933	-		Psest_2380	0.31	-0.3
2,531,933	-		Psest_2380	0.31	+1.1
2,531,933	-		Psest_2380	0.31	-0.2
2,531,935	+		Psest_2380	0.31	-1.0
2,531,936	-		Psest_2380	0.31	+0.4
2,532,003	+		Psest_2380	0.37	+0.1
2,532,022	+		Psest_2380	0.38	-0.5
2,532,022	+		Psest_2380	0.38	-1.4
2,532,022	+		Psest_2380	0.38	-0.8
2,532,022	+		Psest_2380	0.38	-1.0
2,532,022	+		Psest_2380	0.38	+0.1
2,532,023	-		Psest_2380	0.38	+0.2
2,532,023	-		Psest_2380	0.38	-0.3
2,532,056	-		Psest_2380	0.41	+1.2
2,532,163	-		Psest_2380	0.50	-1.4
2,532,184	+		Psest_2380	0.52	+0.1
2,532,185	-		Psest_2380	0.52	-2.5
2,532,185	-		Psest_2380	0.52	-0.0
2,532,185	-		Psest_2380	0.52	+0.3
2,532,185	-		Psest_2380	0.52	+0.0
2,532,200	-		Psest_2380	0.54	-0.5
2,532,202	+		Psest_2380	0.54	-1.4
2,532,202	+		Psest_2380	0.54	-0.3
2,532,203	-		Psest_2380	0.54	+1.1
2,532,203	-		Psest_2380	0.54	-0.2
2,532,203	-		Psest_2380	0.54	+0.6
2,532,203	-		Psest_2380	0.54	+0.5
2,532,203	-		Psest_2380	0.54	+0.5
2,532,208	+		Psest_2380	0.54	-1.2
2,532,208	+		Psest_2380	0.54	-0.8
2,532,208	+		Psest_2380	0.54	-0.6
2,532,208	+		Psest_2380	0.54	+0.8
2,532,208	+		Psest_2380	0.54	-0.6
2,532,208	+		Psest_2380	0.54	-1.1
2,532,208	+		Psest_2380	0.54	-1.1
2,532,208	+		Psest_2380	0.54	-0.8
2,532,208	+		Psest_2380	0.54	-0.1
2,532,208	+		Psest_2380	0.54	-1.3
2,532,208	+		Psest_2380	0.54	-0.3
2,532,208	+		Psest_2380	0.54	-2.5
2,532,208	+		Psest_2380	0.54	-1.4
2,532,208	+		Psest_2380	0.54	-1.3
2,532,208	+		Psest_2380	0.54	-2.5
2,532,208	+		Psest_2380	0.54	-0.8
2,532,208	+		Psest_2380	0.54	-1.0
2,532,208	+		Psest_2380	0.54	-0.0
2,532,208	+		Psest_2380	0.54	-0.4
2,532,208	+		Psest_2380	0.54	-0.8
2,532,208	+		Psest_2380	0.54	-0.4
2,532,208	+		Psest_2380	0.54	-2.5
2,532,208	+		Psest_2380	0.54	-2.7
2,532,208	+		Psest_2380	0.54	-1.4
2,532,208	+		Psest_2380	0.54	-0.9
2,532,208	+		Psest_2380	0.54	-1.3
2,532,208	+		Psest_2380	0.54	-0.8
2,532,208	+		Psest_2380	0.54	+0.4
2,532,209	-		Psest_2380	0.54	-0.2
2,532,209	-		Psest_2380	0.54	-0.7
2,532,209	-		Psest_2380	0.54	-1.5
2,532,209	-		Psest_2380	0.54	+1.6
2,532,209	-		Psest_2380	0.54	-0.6
2,532,209	-		Psest_2380	0.54	-1.1
2,532,209	-		Psest_2380	0.54	-0.2
2,532,209	-		Psest_2380	0.54	-1.3
2,532,209	-		Psest_2380	0.54	+1.0
2,532,209	-		Psest_2380	0.54	-1.0
2,532,209	-		Psest_2380	0.54	+0.6
2,532,209	-		Psest_2380	0.54	-1.0
2,532,209	-		Psest_2380	0.54	+0.2
2,532,209	-		Psest_2380	0.54	-0.3
2,532,209	-		Psest_2380	0.54	+0.4
2,532,209	-		Psest_2380	0.54	-0.0
2,532,209	-		Psest_2380	0.54	-1.3
2,532,209	-		Psest_2380	0.54	+1.6
2,532,209	-		Psest_2380	0.54	+0.5
2,532,209	-		Psest_2380	0.54	-0.9
2,532,209	-		Psest_2380	0.54	-1.2
2,532,209	-		Psest_2380	0.54	+0.6
2,532,209	-		Psest_2380	0.54	+0.6
2,532,209	-		Psest_2380	0.54	-2.0
2,532,209	-		Psest_2380	0.54	-1.4
2,532,209	-		Psest_2380	0.54	-0.0
2,532,209	-		Psest_2380	0.54	+0.1
2,532,209	-		Psest_2380	0.54	-1.2
2,532,209	-		Psest_2380	0.54	+0.6
2,532,209	-		Psest_2380	0.54	+0.4
2,532,209	-		Psest_2380	0.54	-1.2
2,532,209	-		Psest_2380	0.54	-1.0
2,532,209	-		Psest_2380	0.54	-1.5
2,532,209	-		Psest_2380	0.54	+1.2
2,532,209	-		Psest_2380	0.54	+0.5
2,532,209	-		Psest_2380	0.54	-1.2
2,532,209	-		Psest_2380	0.54	-0.9
2,532,212	+		Psest_2380	0.55	-0.1
2,532,212	+		Psest_2380	0.55	-1.0
2,532,213	-		Psest_2380	0.55	-0.6
2,532,213	-		Psest_2380	0.55	-1.5
2,532,213	-		Psest_2380	0.55	+1.0
2,532,522	-		Psest_2380	0.81	-0.8
2,532,522	-		Psest_2380	0.81	-2.0
2,532,568	+		Psest_2380	0.85	-0.6
2,532,605	-		Psest_2380	0.88	-0.4