Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2333

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
2,486,584	+		Psest_2331	0.90	-1.2
2,486,584	+		Psest_2331	0.90	+0.1
2,486,584	+		Psest_2331	0.90	+0.5
2,486,584	+		Psest_2331	0.90	+0.1
2,486,726	+				-0.5
2,486,726	+				+0.2
2,486,775	-		Psest_2332	0.17	+0.8
2,486,786	+		Psest_2332	0.21	+0.4
2,486,786	+		Psest_2332	0.21	+0.1
2,486,786	+		Psest_2332	0.21	-0.9
2,486,786	+		Psest_2332	0.21	-0.3
2,486,786	+		Psest_2332	0.21	-0.8
2,486,786	+		Psest_2332	0.21	-0.0
2,486,786	+		Psest_2332	0.21	+0.5
2,486,786	+		Psest_2332	0.21	-1.1
2,486,787	-		Psest_2332	0.21	+1.0
2,486,787	-		Psest_2332	0.21	-0.1
2,486,787	-		Psest_2332	0.21	+0.4
2,486,787	-		Psest_2332	0.21	-0.5
2,486,787	-		Psest_2332	0.21	-0.4
2,486,787	-		Psest_2332	0.21	+0.0
2,486,787	-		Psest_2332	0.21	-0.4
2,486,787	-		Psest_2332	0.21	+0.1
2,486,811	-		Psest_2332	0.29	+0.2
2,486,888	-		Psest_2332	0.55	-0.9
2,486,896	-		Psest_2332	0.58	+0.3
2,486,900	+		Psest_2332	0.60	+1.1
2,486,900	+		Psest_2332	0.60	-0.6
2,486,901	-		Psest_2332	0.60	-0.4
2,486,901	-		Psest_2332	0.60	+1.0
2,486,905	-		Psest_2332	0.61	+0.4
2,486,905	-		Psest_2332	0.61	-0.2
2,486,905	-		Psest_2332	0.61	-0.6
2,486,905	-		Psest_2332	0.61	+0.4
2,486,933	+		Psest_2332	0.71	+0.5
2,486,933	+		Psest_2332	0.71	-1.6
2,486,933	+		Psest_2332	0.71	+0.4
2,486,933	+		Psest_2332	0.71	-0.7
2,486,933	+		Psest_2332	0.71	-1.2
2,486,933	+		Psest_2332	0.71	+1.0
2,486,934	-		Psest_2332	0.71	+0.8
2,486,934	-		Psest_2332	0.71	+0.2
2,486,934	-		Psest_2332	0.71	-0.2
2,486,934	-		Psest_2332	0.71	-0.4
2,486,934	-		Psest_2332	0.71	-0.3
2,486,934	-		Psest_2332	0.71	+0.3
2,486,934	-		Psest_2332	0.71	+0.4
2,486,934	-		Psest_2332	0.71	+0.2
2,486,942	+		Psest_2332	0.74	-0.2
2,487,080	+				-0.8
2,487,080	+				+1.7
2,487,080	+				-0.1
2,487,080	+				+0.2
2,487,080	+				-0.6
2,487,080	+				-0.7
2,487,080	+				+0.6
2,487,080	+				-0.9
2,487,080	+				-0.1
2,487,080	+				-0.7
2,487,081	-				-0.5
2,487,081	-				-0.9
2,487,081	-				+0.5
2,487,081	-				+0.8
2,487,081	-				+0.9
2,487,081	-				+0.5
2,487,081	-				-0.0
2,487,081	-				+1.6
2,487,081	-				+0.1
2,487,081	-				-0.2
2,487,081	-				+0.7
2,487,081	-				-0.5
2,487,081	-				+0.1
2,487,081	-				-0.7
2,487,081	-				-0.4
2,487,081	-				+1.4
2,487,081	-				+0.5
2,487,081	-				+0.5
2,487,081	-				+0.6
2,487,081	-				+0.6
2,487,081	-				+0.6
2,487,081	-				+0.1
2,487,081	-				+0.1
2,487,081	-				-0.1
2,487,081	-				+1.1
2,487,083	-				-0.6
2,487,099	+				-0.3
2,487,099	+				+1.5
2,487,099	+				-0.4
2,487,100	-				-0.1
2,487,100	-				+0.2
2,487,100	-				+0.1
2,487,100	-				+0.4
2,487,100	-				-0.6
2,487,100	-				+0.4
2,487,100	-				+0.5
2,487,100	-				-0.0
2,487,117	-				+0.1
2,487,157	+				+1.3
2,487,157	+				-0.4
2,487,157	+				+0.7
2,487,157	+				+0.3
2,487,158	-				-0.0
2,487,158	-				+1.0
2,487,209	+				+1.8
2,487,209	+				-0.5
2,487,210	-				-0.1
2,487,210	-				+0.0
2,487,210	-				+0.0
2,487,210	-				-0.4
2,487,210	-				-0.9
2,487,210	-				-0.9
2,487,210	-				+0.3
2,487,210	-				-0.0
2,487,210	-				-0.7
2,487,210	-				+0.6
2,487,217	+				+1.4
2,487,217	+				+0.9
2,487,217	+				+0.3
2,487,217	+				-0.8
2,487,221	+				-0.2
2,487,221	+				-0.0
2,487,221	+				+0.7
2,487,221	+				+0.8
2,487,221	+				-0.8
2,487,221	+				-0.0
2,487,221	+				+0.6
2,487,222	-				+1.1
2,487,222	-				+0.3
2,487,222	-				-0.0
2,487,222	-				+0.3
2,487,222	-				+0.4
2,487,222	-				+0.1
2,487,222	-				-0.1
2,487,222	-				+0.6
2,487,222	-				+1.0
2,487,222	-				-0.6
2,487,270	+				-0.5
2,487,271	-				-0.3
2,487,300	+				+0.0
2,487,323	-				-0.6
2,487,323	-				-0.2
2,487,326	+				-0.3
2,487,327	-				-0.1
2,487,327	-				-0.2
2,487,331	+				-0.2
2,487,331	+				+0.3
2,487,331	+				+0.6
2,487,331	+				-1.6
2,487,331	+				+1.0
2,487,336	+				+0.3
2,487,336	+				-0.2
2,487,336	+				-0.1
2,487,336	+				+0.4
2,487,336	+				-0.6
2,487,337	-				-2.9
2,487,338	+				-0.0
2,487,339	-				-0.8
2,487,339	-				-1.6
2,487,339	-				-0.4
2,487,339	-				-0.8
2,487,339	-				+1.4
2,487,342	+				+0.4
2,487,342	+				+0.5
2,487,342	+				-0.1
2,487,342	+				+0.2
2,487,342	+				+0.1
2,487,343	-				+0.2
2,487,343	-				-0.5
2,487,343	-				-1.0
2,487,343	-				-0.1
2,487,343	-				-0.4
2,487,343	-				-0.4
2,487,345	+				+0.6
2,487,345	+				+1.1
2,487,345	+				+0.2
2,487,345	+				+0.7
2,487,345	+				-2.2
2,487,345	+				-0.5
2,487,345	+				-1.3
2,487,346	-				-0.7
2,487,346	-				+0.1
2,487,346	-				-0.7
2,487,346	-				-0.7
2,487,346	-				-2.9
2,487,346	-				-1.3
2,487,346	-				+0.1
2,487,346	-				-0.6
2,487,346	-				-1.2
2,487,346	-				-0.5
2,487,346	-				-1.0
2,487,382	-				-0.5
2,487,557	-		Psest_2333	0.62	-1.1
2,487,661	+				-0.0
2,487,661	+				-1.6
2,487,661	+				-0.5
2,487,661	+				-0.2
2,487,662	-				-0.5
2,487,662	-				-2.2
2,487,662	-				-0.5
2,487,662	-				+1.0
2,487,662	-				+0.9
2,487,662	-				+0.0
2,487,662	-				+0.6
2,487,662	-				-0.5
2,487,662	-				+0.3
2,487,662	-				-0.1
2,487,662	-				-0.2
2,487,662	-				-0.8
2,487,662	-				-0.2
2,487,670	-				-0.3
2,487,727	+				+0.8
2,487,728	-				+0.5
2,487,728	-				+2.3
2,487,728	-				+0.3
2,487,728	-				-0.8
2,487,872	+		Psest_2334	0.15	-0.4
2,487,873	-		Psest_2334	0.15	-1.7
2,487,873	-		Psest_2334	0.15	-0.3
2,487,952	+		Psest_2334	0.23	-0.5
2,487,953	-		Psest_2334	0.23	-0.2
2,487,953	-		Psest_2334	0.23	+1.1
2,487,983	-		Psest_2334	0.27	+0.5
2,488,150	+		Psest_2334	0.44	-0.3
2,488,151	-		Psest_2334	0.44	+0.6
2,488,151	-		Psest_2334	0.44	-0.5
2,488,274	+		Psest_2334	0.57	-1.4
2,488,274	+		Psest_2334	0.57	+0.0
2,488,274	+		Psest_2334	0.57	+0.0
2,488,274	+		Psest_2334	0.57	-0.8
2,488,275	-		Psest_2334	0.57	-0.7
2,488,275	-		Psest_2334	0.57	+0.5
2,488,275	-		Psest_2334	0.57	+0.2
2,488,275	-		Psest_2334	0.57	-0.3
2,488,331	+		Psest_2334	0.63	-0.6
2,488,331	+		Psest_2334	0.63	-1.1
2,488,331	+		Psest_2334	0.63	-0.2
2,488,331	+		Psest_2334	0.63	-0.9
2,488,331	+		Psest_2334	0.63	-0.7
2,488,332	-		Psest_2334	0.63	+0.6
2,488,332	-		Psest_2334	0.63	+2.0
2,488,332	-		Psest_2334	0.63	-0.3
2,488,332	-		Psest_2334	0.63	+0.7
2,488,332	-		Psest_2334	0.63	+0.5
2,488,332	-		Psest_2334	0.63	+0.1
2,488,332	-		Psest_2334	0.63	+0.5
2,488,332	-		Psest_2334	0.63	-1.4
2,488,357	+		Psest_2334	0.65	-0.5
2,488,358	-		Psest_2334	0.65	+0.0
2,488,360	+		Psest_2334	0.66	+0.8
2,488,360	+		Psest_2334	0.66	-0.3
2,488,360	+		Psest_2334	0.66	-2.1
2,488,360	+		Psest_2334	0.66	+0.4
2,488,360	+		Psest_2334	0.66	-0.5
2,488,360	+		Psest_2334	0.66	-0.6
2,488,360	+		Psest_2334	0.66	-0.5
2,488,360	+		Psest_2334	0.66	-1.1
2,488,360	+		Psest_2334	0.66	+0.4
2,488,361	-		Psest_2334	0.66	+0.4
2,488,361	-		Psest_2334	0.66	-0.1
2,488,361	-		Psest_2334	0.66	-0.4
2,488,361	-		Psest_2334	0.66	-0.8
2,488,361	-		Psest_2334	0.66	+0.3
2,488,363	+		Psest_2334	0.66	-0.4
2,488,363	+		Psest_2334	0.66	+1.0
2,488,363	+		Psest_2334	0.66	+0.0
2,488,363	+		Psest_2334	0.66	-0.0
2,488,364	-		Psest_2334	0.66	-0.4
2,488,382	+		Psest_2334	0.68	+0.3
2,488,383	-		Psest_2334	0.68	+0.8
2,488,550	-		Psest_2334	0.85	+0.2
2,488,550	-		Psest_2334	0.85	-0.0
2,488,550	-		Psest_2334	0.85	+0.3
2,488,550	-		Psest_2334	0.85	-0.3