Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2177

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
2,332,454	-				-1.3
2,332,616	-		Psest_2175	0.24	-0.3
2,332,616	-		Psest_2175	0.24	-1.1
2,332,814	-		Psest_2175	0.61	-1.1
2,332,814	-		Psest_2175	0.61	-0.8
2,332,817	+		Psest_2175	0.62	-0.1
2,332,843	+		Psest_2175	0.67	-0.8
2,332,843	+		Psest_2175	0.67	-0.4
2,332,843	+		Psest_2175	0.67	+0.1
2,332,843	+		Psest_2175	0.67	-1.9
2,332,843	+		Psest_2175	0.67	-1.4
2,332,844	-		Psest_2175	0.67	-0.5
2,332,844	-		Psest_2175	0.67	-0.4
2,332,844	-		Psest_2175	0.67	-0.2
2,332,898	+		Psest_2175	0.77	+0.6
2,332,898	+		Psest_2175	0.77	+0.2
2,332,898	+		Psest_2175	0.77	+0.4
2,332,898	+		Psest_2175	0.77	-0.1
2,332,898	+		Psest_2175	0.77	-0.4
2,332,898	+		Psest_2175	0.77	-0.2
2,332,899	-		Psest_2175	0.77	-0.3
2,332,975	+				+0.3
2,332,975	+				+0.9
2,333,211	+		Psest_2176	0.31	-0.3
2,333,211	+		Psest_2176	0.31	-0.9
2,333,211	+		Psest_2176	0.31	+0.5
2,333,211	+		Psest_2176	0.31	+0.2
2,333,219	+		Psest_2176	0.34	+0.3
2,333,220	-		Psest_2176	0.34	-0.3
2,333,220	-		Psest_2176	0.34	+0.3
2,333,269	+		Psest_2176	0.52	+0.2
2,333,269	+		Psest_2176	0.52	-0.1
2,333,269	+		Psest_2176	0.52	-0.4
2,333,270	-		Psest_2176	0.52	-0.2
2,333,353	+		Psest_2176	0.81	-1.6
2,333,353	+		Psest_2176	0.81	+0.3
2,333,354	-		Psest_2176	0.81	+0.4
2,333,354	-		Psest_2176	0.81	+0.9
2,333,354	-		Psest_2176	0.81	-0.2
2,333,354	-		Psest_2176	0.81	-0.7
2,333,354	-		Psest_2176	0.81	-0.2
2,333,354	-		Psest_2176	0.81	-1.1
2,333,537	-		Psest_2177	0.43	-0.6
2,333,644	+		Psest_2177	0.82	-0.7
2,333,644	+		Psest_2177	0.82	-0.0
2,333,645	-		Psest_2177	0.82	-0.1
2,333,645	-		Psest_2177	0.82	-0.9
2,333,645	-		Psest_2177	0.82	-0.7
2,333,645	-		Psest_2177	0.82	-1.6
2,333,645	-		Psest_2177	0.82	-2.4
2,333,645	-		Psest_2177	0.82	-1.3
2,333,687	+				-0.0
2,333,693	+				-1.4
2,333,693	+				+0.0
2,333,693	+				-0.1
2,333,694	-				+0.1
2,333,694	-				-0.5
2,333,709	-				-1.4
2,333,776	-				+0.2
2,333,795	+				-0.9
2,333,795	+				-0.4
2,333,795	+				+0.3
2,333,796	-				-1.1
2,333,807	+				-0.7
2,333,808	-				-0.2
2,333,808	-				+0.9
2,333,843	+				-1.7
2,333,844	-				-0.0
2,333,916	-				+0.9
2,333,937	+				+0.6
2,333,937	+				-1.1
2,333,937	+				-0.9
2,333,937	+				+0.0
2,333,937	+				-1.1
2,333,937	+				-0.2
2,333,937	+				+0.9
2,333,938	-				-0.1
2,333,938	-				-1.0
2,333,938	-				+0.3
2,333,938	-				+0.0
2,333,938	-				-0.6
2,333,938	-				+0.9
2,333,938	-				-0.4
2,333,938	-				+0.5
2,333,938	-				-0.1
2,333,938	-				-0.5
2,333,941	+				-0.3
2,333,941	+				-1.1
2,333,942	-				-3.0
2,333,942	-				-0.2
2,333,942	-				-0.6
2,333,944	+				-2.4
2,333,944	+				-0.3
2,333,944	+				+0.3
2,333,944	+				-1.7
2,333,945	-				-1.2
2,334,259	-				+0.2
2,334,307	-				-0.1
2,334,426	+				-2.1
2,334,426	+				-0.3
2,334,523	+				-0.3
2,334,523	+				+0.4
2,334,523	+				-1.1
2,334,523	+				+0.0
2,334,524	-				-0.2
2,334,524	-				-0.9
2,334,544	-				+0.0
2,334,544	-				-0.2