Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2069

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
2,196,198	-		Psest_2068	0.53	+0.6
2,196,198	-		Psest_2068	0.53	-0.5
2,196,198	-		Psest_2068	0.53	-0.4
2,196,198	-		Psest_2068	0.53	+0.3
2,196,198	-		Psest_2068	0.53	-0.3
2,196,282	-		Psest_2068	0.58	+1.3
2,196,282	-		Psest_2068	0.58	-2.4
2,196,282	-		Psest_2068	0.58	-0.5
2,196,282	-		Psest_2068	0.58	-1.2
2,196,358	+		Psest_2068	0.62	+0.5
2,196,359	-		Psest_2068	0.62	+0.1
2,196,435	-		Psest_2068	0.66	-0.4
2,196,455	-		Psest_2068	0.67	-0.4
2,196,696	-		Psest_2068	0.80	-1.0
2,196,756	-		Psest_2068	0.84	+0.5
2,196,756	-		Psest_2068	0.84	+0.5
2,196,850	-		Psest_2068	0.89	-0.4
2,196,850	-		Psest_2068	0.89	+0.4
2,196,958	-				-0.8
2,196,958	-				-0.3
2,196,958	-				-0.1
2,196,958	-				+0.5
2,196,958	-				-0.6
2,196,958	-				+0.4
2,196,958	-				-0.8
2,197,037	-				-0.7
2,197,109	-				-1.4
2,197,119	-				-0.9
2,197,119	-				+0.5
2,197,203	+				+0.1
2,197,204	-				-1.2
2,197,204	-				-0.6
2,197,299	+				+0.7
2,197,318	-				+0.1
2,197,338	+		Psest_2069	0.11	-0.3
2,197,338	+		Psest_2069	0.11	+0.2
2,197,387	+		Psest_2069	0.15	-0.1
2,197,388	-		Psest_2069	0.15	+0.6
2,197,388	-		Psest_2069	0.15	+0.3
2,197,391	+		Psest_2069	0.15	+0.3
2,197,391	+		Psest_2069	0.15	+1.2
2,197,391	+		Psest_2069	0.15	-0.9
2,197,391	+		Psest_2069	0.15	+0.9
2,197,392	-		Psest_2069	0.15	-1.6
2,197,392	-		Psest_2069	0.15	-0.6
2,197,394	+		Psest_2069	0.15	+0.2
2,197,394	+		Psest_2069	0.15	+2.1
2,197,394	+		Psest_2069	0.15	+0.4
2,197,394	+		Psest_2069	0.15	+0.3
2,197,394	+		Psest_2069	0.15	-0.2
2,197,394	+		Psest_2069	0.15	+0.9
2,197,394	+		Psest_2069	0.15	-0.5
2,197,394	+		Psest_2069	0.15	-0.3
2,197,394	+		Psest_2069	0.15	-1.9
2,197,394	+		Psest_2069	0.15	+0.1
2,197,394	+		Psest_2069	0.15	+0.3
2,197,395	-		Psest_2069	0.15	+1.1
2,197,395	-		Psest_2069	0.15	+0.8
2,197,395	-		Psest_2069	0.15	+0.3
2,197,395	-		Psest_2069	0.15	+0.2
2,197,395	-		Psest_2069	0.15	-0.1
2,197,395	-		Psest_2069	0.15	-1.3
2,197,395	-		Psest_2069	0.15	-0.6
2,197,395	-		Psest_2069	0.15	+1.2
2,197,634	+		Psest_2069	0.31	-0.2
2,197,634	+		Psest_2069	0.31	-0.8
2,197,634	+		Psest_2069	0.31	-0.1
2,197,634	+		Psest_2069	0.31	+0.3
2,197,634	+		Psest_2069	0.31	+0.2
2,197,635	-		Psest_2069	0.31	-0.7
2,197,635	-		Psest_2069	0.31	-0.2
2,197,635	-		Psest_2069	0.31	+0.5
2,197,822	+		Psest_2069	0.44	+1.2
2,197,957	-		Psest_2069	0.53	+0.4
2,197,957	-		Psest_2069	0.53	-1.6
2,198,032	+		Psest_2069	0.58	+2.9
2,198,298	+		Psest_2069	0.76	-0.2
2,198,365	+		Psest_2069	0.81	-1.4
2,198,365	+		Psest_2069	0.81	+0.6
2,198,365	+		Psest_2069	0.81	+0.6
2,198,365	+		Psest_2069	0.81	+0.3
2,198,365	+		Psest_2069	0.81	+0.2
2,198,367	+		Psest_2069	0.81	+0.5
2,198,367	+		Psest_2069	0.81	-0.5
2,198,367	+		Psest_2069	0.81	-0.2
2,198,367	+		Psest_2069	0.81	+2.1
2,198,367	+		Psest_2069	0.81	+0.7
2,198,367	+		Psest_2069	0.81	+0.0
2,198,367	+		Psest_2069	0.81	+0.7
2,198,368	-		Psest_2069	0.81	+0.4
2,198,368	-		Psest_2069	0.81	+1.4
2,198,368	-		Psest_2069	0.81	-0.2
2,198,368	-		Psest_2069	0.81	-1.0
2,198,368	-		Psest_2069	0.81	-1.4
2,198,368	-		Psest_2069	0.81	+1.9
2,198,368	-		Psest_2069	0.81	+0.7
2,198,375	+		Psest_2069	0.82	-0.0
2,198,376	-		Psest_2069	0.82	-0.7
2,198,528	+				-0.8
2,198,529	-				-0.4
2,198,529	-				-0.3
2,198,529	-				-0.3
2,198,672	-				+0.2
2,198,672	-				-0.5
2,198,672	-				+0.1
2,198,672	-				-0.4
2,198,797	+				-0.4
2,198,797	+				-0.5
2,198,797	+				-0.2
2,198,797	+				+0.3
2,198,798	-				+0.5
2,198,798	-				+0.9
2,198,798	-				-0.3
2,198,798	-				-0.7
2,198,798	-				+0.2
2,198,798	-				-0.2
2,198,798	-				+0.6
2,198,798	-				+0.4
2,198,798	-				-0.4
2,198,800	+				-0.1
2,198,800	+				-0.9
2,198,800	+				+1.2
2,198,801	-				-0.6
2,199,078	+		Psest_2070	0.29	+0.2
2,199,178	+		Psest_2070	0.36	-0.1
2,199,178	+		Psest_2070	0.36	+0.7
2,199,397	+		Psest_2070	0.51	+0.7
2,199,398	-		Psest_2070	0.51	+0.9
2,199,398	-		Psest_2070	0.51	-1.3
2,199,484	+		Psest_2070	0.57	+0.2
2,199,484	+		Psest_2070	0.57	+0.4
2,199,484	+		Psest_2070	0.57	-0.7
2,199,484	+		Psest_2070	0.57	+0.2
2,199,484	+		Psest_2070	0.57	-0.7
2,199,484	+		Psest_2070	0.57	-1.1
2,199,484	+		Psest_2070	0.57	-0.0
2,199,484	+		Psest_2070	0.57	-1.4
2,199,484	+		Psest_2070	0.57	+1.6
2,199,485	-		Psest_2070	0.57	-0.4
2,199,485	-		Psest_2070	0.57	-1.1
2,199,485	-		Psest_2070	0.57	+0.5
2,199,589	+		Psest_2070	0.64	+0.2
2,199,589	+		Psest_2070	0.64	+0.3
2,199,589	+		Psest_2070	0.64	+0.4
2,199,589	+		Psest_2070	0.64	-0.5
2,199,589	+		Psest_2070	0.64	+0.3
2,199,589	+		Psest_2070	0.64	-0.4
2,199,637	+		Psest_2070	0.68	-1.9
2,199,638	-		Psest_2070	0.68	+0.1
2,199,646	+		Psest_2070	0.68	+0.2