Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1647

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
1,749,371	+		Psest_1646	0.10	+1.0
1,749,371	+		Psest_1646	0.10	-0.6
1,749,371	+		Psest_1646	0.10	+0.7
1,749,371	+		Psest_1646	0.10	+1.6
1,749,371	+		Psest_1646	0.10	+0.8
1,749,371	+		Psest_1646	0.10	-0.6
1,749,371	+		Psest_1646	0.10	+0.4
1,749,371	+		Psest_1646	0.10	-1.8
1,749,372	-		Psest_1646	0.10	-0.1
1,749,372	-		Psest_1646	0.10	-1.1
1,749,372	-		Psest_1646	0.10	-0.1
1,749,372	-		Psest_1646	0.10	-0.5
1,749,372	-		Psest_1646	0.10	+0.0
1,749,621	+		Psest_1646	0.46	+0.7
1,749,622	-		Psest_1646	0.47	-0.4
1,749,853	+		Psest_1646	0.80	-0.6
1,749,853	+		Psest_1646	0.80	-0.6
1,749,970	+				+0.3
1,750,542	-		Psest_1647	0.14	-3.1
1,750,638	+		Psest_1647	0.18	-0.2
1,750,638	+		Psest_1647	0.18	-2.3
1,750,639	-		Psest_1647	0.18	-2.0
1,750,639	-		Psest_1647	0.18	-1.1
1,750,639	-		Psest_1647	0.18	-0.2
1,750,639	-		Psest_1647	0.18	+1.0
1,750,976	-		Psest_1647	0.31	-0.0
1,751,655	+		Psest_1647	0.57	-0.0
1,751,864	-		Psest_1647	0.65	+1.0
1,752,465	-		Psest_1647	0.89	-1.3
1,752,614	+				-0.9
1,752,614	+				-0.4
1,752,614	+				-0.5
1,752,615	-				-0.1
1,752,615	-				-1.8
1,752,615	-				+0.4
1,753,063	+		Psest_1648	0.12	+0.7
1,753,063	+		Psest_1648	0.12	-0.6
1,753,063	+		Psest_1648	0.12	-0.9
1,753,064	-		Psest_1648	0.12	-1.3
1,753,178	+		Psest_1648	0.19	-0.4
1,753,178	+		Psest_1648	0.19	-0.8
1,753,187	+		Psest_1648	0.19	-0.6
1,753,188	-		Psest_1648	0.19	-0.2
1,753,188	-		Psest_1648	0.19	-0.8
1,753,189	+		Psest_1648	0.19	+1.0
1,753,189	+		Psest_1648	0.19	-0.8
1,753,189	+		Psest_1648	0.19	+1.5
1,753,190	-		Psest_1648	0.19	-1.2
1,753,190	-		Psest_1648	0.19	+0.2
1,753,190	-		Psest_1648	0.19	+0.7
1,753,223	+		Psest_1648	0.21	-2.8
1,753,223	+		Psest_1648	0.21	-1.5
1,753,224	-		Psest_1648	0.21	-0.0
1,753,224	-		Psest_1648	0.21	-0.0
1,753,224	-		Psest_1648	0.21	+0.1
1,753,224	-		Psest_1648	0.21	+0.2
1,753,520	+		Psest_1648	0.39	+0.5
1,753,520	+		Psest_1648	0.39	-0.1
1,753,520	+		Psest_1648	0.39	+0.3