Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1424

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
1,533,134	+		Psest_1423	0.72	+1.6
1,533,138	+		Psest_1423	0.72	-1.5
1,533,138	+		Psest_1423	0.72	+1.7
1,533,139	-		Psest_1423	0.72	-0.2
1,533,144	+		Psest_1423	0.73	-0.4
1,533,144	+		Psest_1423	0.73	-0.5
1,533,144	+				+1.1
1,533,145	-		Psest_1423	0.73	-0.5
1,533,145	-		Psest_1423	0.73	-1.1
1,533,145	-		Psest_1423	0.73	+0.5
1,533,145	-		Psest_1423	0.73	-0.8
1,533,280	-		Psest_1423	0.79	+0.1
1,533,280	-		Psest_1423	0.79	+0.1
1,533,280	-		Psest_1423	0.79	+0.1
1,533,280	-		Psest_1423	0.79	-0.9
1,533,312	-		Psest_1423	0.80	+0.8
1,533,436	+		Psest_1423	0.86	+1.1
1,533,436	+		Psest_1423	0.86	-0.1
1,533,436	+		Psest_1423	0.86	+2.1
1,533,436	+		Psest_1423	0.86	+0.1
1,533,436	+		Psest_1423	0.86	-0.8
1,533,436	+		Psest_1423	0.86	+0.5
1,533,436	+		Psest_1423	0.86	+0.1
1,533,437	-		Psest_1423	0.86	-0.5
1,533,439	+		Psest_1423	0.86	+0.1
1,533,439	+		Psest_1423	0.86	-0.9
1,533,439	+		Psest_1423	0.86	+1.1
1,533,439	+		Psest_1423	0.86	+2.1
1,533,440	-		Psest_1423	0.86	-0.6
1,533,440	-		Psest_1423	0.86	+1.1
1,533,534	+				+0.8
1,533,534	+				+0.1
1,533,534	+				-0.4
1,533,534	+				-0.5
1,533,535	-				+3.1
1,533,602	+				+0.1
1,533,636	-				+0.4
1,533,732	+				-0.1
1,533,817	+				-0.9
1,533,817	+				+1.1
1,533,875	+				-0.9
1,533,875	+				+1.1
1,533,876	-				-0.9
1,533,876	-				+0.5
1,533,876	-				-0.5
1,533,900	-				-0.3
1,533,903	+				-0.2
1,533,912	-				-0.9
1,533,913	+				+1.1
1,534,000	+				+2.1
1,534,000	+				-1.3
1,534,000	+				-1.2
1,534,001	-				-1.5
1,534,001	-				+0.6
1,534,001	-				-0.9
1,534,010	+				-0.5
1,534,107	+				-0.9
1,534,210	+		Psest_1424	0.13	-1.2
1,534,211	-		Psest_1424	0.13	-0.5
1,534,315	+		Psest_1424	0.27	+0.1
1,534,315	+		Psest_1424	0.27	-0.9
1,534,315	+		Psest_1424	0.27	+1.7
1,534,315	+		Psest_1424	0.27	+1.1
1,534,315	+		Psest_1424	0.27	-0.7
1,534,620	-		Psest_1424	0.66	-0.9
1,534,884	+				+0.4
1,534,894	+				+0.5
1,535,579	+				+0.1
1,535,811	+				-0.2
1,535,811	+				-0.5
1,535,812	-				+0.4