Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1361

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
1,470,165	-				+2.3
1,470,336	+		Psest_1360	0.16	-0.2
1,470,336	+		Psest_1360	0.16	+0.3
1,470,336	+		Psest_1360	0.16	+0.2
1,470,337	-		Psest_1360	0.16	+0.2
1,470,337	-		Psest_1360	0.16	+0.1
1,470,337	-		Psest_1360	0.16	-0.9
1,470,769	+		Psest_1360	0.61	-1.4
1,471,474	+		Psest_1361	0.43	+0.2
1,471,474	+		Psest_1361	0.43	-1.1
1,471,475	-		Psest_1361	0.43	-0.4
1,471,475	-		Psest_1361	0.43	+0.1
1,471,475	-		Psest_1361	0.43	-1.5
1,471,475	-		Psest_1361	0.43	-0.8
1,471,475	-		Psest_1361	0.43	-1.4
1,471,475	-		Psest_1361	0.43	-1.1
1,471,764	+		Psest_1361	0.81	+0.3
1,471,764	+		Psest_1361	0.81	+0.3
1,471,764	+		Psest_1361	0.81	-0.7
1,471,804	+		Psest_1361	0.86	-1.0
1,472,635	+				+0.5
1,472,635	+				-0.0
1,472,635	+				-1.2
1,472,636	-				-0.2
1,472,636	-				-1.3
1,472,636	-				+1.1
1,472,636	-				+0.4
1,472,716	+		Psest_1363	0.13	+0.1
1,472,716	+		Psest_1363	0.13	+0.5
1,472,716	+		Psest_1363	0.13	-0.3
1,472,716	+		Psest_1363	0.13	-2.8
1,472,716	+		Psest_1363	0.13	+0.7
1,472,717	-		Psest_1363	0.13	-0.3
1,472,717	-		Psest_1363	0.13	+0.5
1,472,717	-		Psest_1363	0.13	-1.2