Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1056

Experiment: Def 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def 5-Hydroxymethylfurfural 5 mM
1,144,310	+		Psest_1055	0.48	+0.6
1,144,310	+		Psest_1055	0.48	+0.4
1,144,400	+		Psest_1055	0.55	-1.1
1,144,400	+		Psest_1055	0.55	-0.2
1,144,450	-		Psest_1055	0.59	+2.7
1,144,450	-		Psest_1055	0.59	+0.7
1,144,487	+		Psest_1055	0.62	-0.5
1,144,487	+		Psest_1055	0.62	+0.5
1,144,487	+		Psest_1055	0.62	-1.5
1,144,487	+		Psest_1055	0.62	+0.4
1,144,488	-		Psest_1055	0.62	-1.7
1,144,488	-		Psest_1055	0.62	+0.1
1,144,488	-		Psest_1055	0.62	-0.9
1,144,488	-		Psest_1055	0.62	-0.2
1,144,488	-		Psest_1055	0.62	+0.3
1,144,488	-		Psest_1055	0.62	+0.3
1,144,488	-		Psest_1055	0.62	-0.3
1,144,488	-		Psest_1055	0.62	-0.3
1,144,501	+		Psest_1055	0.64	+0.6
1,144,502	-		Psest_1055	0.64	+2.1
1,144,625	+		Psest_1055	0.74	-0.5
1,144,626	-		Psest_1055	0.74	-0.8
1,144,697	+		Psest_1055	0.80	-0.5
1,144,697	+		Psest_1055	0.80	-0.5
1,144,698	-		Psest_1055	0.80	-0.5
1,144,698	-		Psest_1055	0.80	-0.8
1,144,698	-		Psest_1055	0.80	-0.2
1,144,724	+		Psest_1055	0.82	-1.1
1,144,754	+		Psest_1055	0.85	+0.2
1,144,754	+		Psest_1055	0.85	-0.1
1,144,755	-		Psest_1055	0.85	-0.6
1,144,767	+		Psest_1055	0.86	+1.4
1,144,988	+				+0.7
1,144,996	+				+0.9
1,144,997	-				-0.2
1,144,997	-				-0.5
1,144,997	-				-1.7
1,144,997	-				-1.0
1,145,036	+				+1.4
1,145,037	-				-1.2
1,145,241	+				-0.6
1,145,242	-				-1.6
1,145,284	+				+1.1
1,145,615	+		Psest_1056	0.21	+0.5
1,145,615	+		Psest_1056	0.21	-0.6
1,145,828	+		Psest_1056	0.35	-0.8
1,146,635	+		Psest_1056	0.87	-1.2
1,146,764	+				-0.6
1,147,625	+				-0.1
1,147,625	+				+0.7
1,147,625	+				-0.5
1,147,625	+				-0.5
1,147,625	+				+0.2
1,147,625	+				+1.5
1,147,625	+				-1.5
1,147,625	+				-0.2
1,147,625	+				-0.2
1,147,626	-				-0.4
1,147,626	-				-0.4
1,147,626	-				+0.3
1,147,626	-				+0.7
1,147,626	-				+0.6
1,147,626	-				-0.6
1,147,626	-				+0.5
1,147,626	-				-0.6
1,147,626	-				-1.5
1,147,626	-				-0.7
1,147,626	-				+0.0
1,147,626	-				-0.5
1,147,626	-				-0.7
1,147,626	-				-0.7
1,147,637	+				-1.2
1,147,712	-		Psest_1058	0.15	-1.6
1,147,768	+		Psest_1058	0.27	+0.2