Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0973

Experiment: Def 2-Furfuraldehyde 0.032 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_0972 and Psest_0973 are separated by 164 nucleotidesPsest_0973 and Psest_0974 are separated by 10 nucleotides Psest_0972: Psest_0972 - ATP-dependent metalloprotease FtsH, at 1,054,789 to 1,056,708 _0972 Psest_0973: Psest_0973 - dihydropteroate synthase, at 1,056,873 to 1,057,724 _0973 Psest_0974: Psest_0974 - phosphoglucosamine mutase, at 1,057,735 to 1,059,072 _0974 Position (kb) 1056 1057 1058Strain fitness (log2 ratio) -1 0 1 2 3 4at 1056.742 kb on + strandat 1056.742 kb on + strandat 1056.743 kb on - strandat 1056.788 kb on - strandat 1056.877 kb on + strandat 1056.878 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol%
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1,056,742 + -0.6
1,056,742 + +3.8
1,056,743 - +1.9
1,056,788 - -0.4
1,056,877 + +0.7
1,056,878 - +0.4

Or see this region's nucleotide sequence