Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0711 and Psest_0712 are separated by 196 nucleotides Psest_0712 and Psest_0713 are separated by 9 nucleotides Psest_0713 and Psest_0714 are separated by 5 nucleotides Psest_0714 and Psest_0715 are separated by 113 nucleotides Psest_0715 and Psest_0716 are separated by 53 nucleotides Psest_0716 and Psest_0717 are separated by 121 nucleotides
Psest_0711: Psest_0711 - ATP-dependent chaperone ClpB, at 780,353 to 782,917
_0711
Psest_0712: Psest_0712 - tRNA_Asn_GTT, at 783,114 to 783,189
_0712
Psest_0713: Psest_0713 - tRNA_Pro_TGG, at 783,199 to 783,275
_0713
Psest_0714: Psest_0714 - tRNA_Lys_TTT, at 783,281 to 783,356
_0714
Psest_0715: Psest_0715 - NADH dehydrogenase, FAD-containing subunit, at 783,470 to 784,765
_0715
Psest_0716: Psest_0716 - Protein of unknown function (DUF3094)., at 784,819 to 784,992
_0716
Psest_0717: Psest_0717 - Protein of unknown function (DUF1631)., at 785,114 to 787,372
_0717
Position (kb) 783
784
785 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 782.924 kb on + strand at 782.924 kb on + strand at 783.013 kb on + strand at 783.014 kb on - strand at 783.030 kb on - strand at 783.357 kb on + strand at 783.357 kb on + strand at 783.357 kb on + strand at 783.535 kb on + strand at 783.550 kb on - strand at 783.550 kb on - strand at 783.550 kb on - strand at 783.550 kb on - strand at 783.550 kb on - strand at 783.550 kb on - strand at 783.583 kb on + strand at 783.583 kb on + strand at 783.584 kb on - strand at 783.585 kb on + strand at 783.585 kb on + strand at 783.585 kb on + strand at 783.585 kb on + strand at 783.585 kb on + strand at 783.585 kb on + strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.586 kb on - strand at 783.696 kb on + strand, within Psest_0715 at 783.696 kb on + strand, within Psest_0715 at 783.696 kb on + strand, within Psest_0715 at 783.696 kb on + strand, within Psest_0715 at 783.702 kb on + strand, within Psest_0715 at 784.046 kb on + strand, within Psest_0715 at 784.116 kb on - strand, within Psest_0715 at 784.179 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.303 kb on - strand, within Psest_0715 at 784.303 kb on - strand, within Psest_0715 at 784.431 kb on + strand, within Psest_0715 at 784.431 kb on + strand, within Psest_0715 at 784.431 kb on + strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.572 kb on + strand, within Psest_0715 at 784.572 kb on + strand, within Psest_0715 at 784.572 kb on + strand, within Psest_0715 at 784.572 kb on + strand, within Psest_0715 at 784.572 kb on + strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.749 kb on - strand at 784.778 kb on + strand at 784.778 kb on + strand at 784.778 kb on + strand at 784.778 kb on + strand at 784.778 kb on + strand at 784.779 kb on - strand at 784.779 kb on - strand at 784.779 kb on - strand at 784.779 kb on - strand at 784.946 kb on + strand, within Psest_0716 at 784.946 kb on + strand, within Psest_0716 at 784.947 kb on - strand, within Psest_0716 at 784.947 kb on - strand, within Psest_0716 at 784.992 kb on + strand at 785.021 kb on + strand at 785.021 kb on + strand at 785.021 kb on + strand at 785.021 kb on + strand at 785.021 kb on + strand at 785.022 kb on - strand at 785.022 kb on - strand at 785.022 kb on - strand at 785.022 kb on - strand at 785.022 kb on - strand at 785.022 kb on - strand at 785.022 kb on - strand at 785.025 kb on + strand at 785.026 kb on - strand at 785.026 kb on - strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.278 kb on - strand at 785.278 kb on - strand at 785.278 kb on - strand at 785.278 kb on - strand at 785.278 kb on - strand at 785.717 kb on + strand, within Psest_0717 at 785.737 kb on + strand, within Psest_0717 at 785.737 kb on + strand, within Psest_0717 at 785.737 kb on + strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 782,924 + -0.5 782,924 + +0.3 783,013 + +1.1 783,014 - -0.0 783,030 - -1.3 783,357 + +3.3 783,357 + +2.0 783,357 + -0.0 783,535 + +1.0 783,550 - -0.5 783,550 - +0.1 783,550 - +0.2 783,550 - -0.5 783,550 - +0.8 783,550 - -0.2 783,583 + +0.4 783,583 + -1.0 783,584 - -1.5 783,585 + -1.9 783,585 + -1.0 783,585 + -2.3 783,585 + +3.0 783,585 + -1.2 783,585 + -0.3 783,586 - +1.3 783,586 - +0.2 783,586 - +0.1 783,586 - -0.4 783,586 - +1.1 783,586 - -1.6 783,586 - +1.2 783,586 - -0.6 783,586 - -1.6 783,586 - -0.8 783,586 - -1.4 783,696 + Psest_0715 0.17 -0.7 783,696 + Psest_0715 0.17 -2.1 783,696 + Psest_0715 0.17 -1.0 783,696 + Psest_0715 0.17 +0.1 783,702 + Psest_0715 0.18 -0.3 784,046 + Psest_0715 0.44 -1.6 784,116 - Psest_0715 0.50 -2.0 784,179 + Psest_0715 0.55 +0.5 784,300 + Psest_0715 0.64 -2.5 784,300 + Psest_0715 0.64 -2.1 784,300 + Psest_0715 0.64 -0.5 784,300 + Psest_0715 0.64 -1.6 784,300 + Psest_0715 0.64 -1.2 784,300 + Psest_0715 0.64 +0.6 784,300 + Psest_0715 0.64 -1.6 784,300 + Psest_0715 0.64 +0.0 784,300 + Psest_0715 0.64 -1.6 784,300 + Psest_0715 0.64 -0.3 784,301 - Psest_0715 0.64 -2.7 784,301 - Psest_0715 0.64 +1.0 784,301 - Psest_0715 0.64 +2.0 784,301 - Psest_0715 0.64 -3.1 784,301 - Psest_0715 0.64 -2.8 784,301 - Psest_0715 0.64 -0.0 784,301 - Psest_0715 0.64 -0.1 784,301 - Psest_0715 0.64 -1.9 784,301 - Psest_0715 0.64 -0.0 784,301 - Psest_0715 0.64 +1.0 784,301 - Psest_0715 0.64 +1.4 784,301 - Psest_0715 0.64 -1.2 784,302 + Psest_0715 0.64 +1.7 784,302 + Psest_0715 0.64 -0.8 784,302 + Psest_0715 0.64 -1.8 784,302 + Psest_0715 0.64 -0.6 784,302 + Psest_0715 0.64 -2.3 784,302 + Psest_0715 0.64 -1.6 784,302 + Psest_0715 0.64 -0.5 784,302 + Psest_0715 0.64 -2.5 784,303 - Psest_0715 0.64 -1.8 784,303 - Psest_0715 0.64 -2.0 784,431 + Psest_0715 0.74 -1.3 784,431 + Psest_0715 0.74 -1.0 784,431 + Psest_0715 0.74 -3.0 784,432 - Psest_0715 0.74 +2.0 784,432 - Psest_0715 0.74 -1.6 784,432 - Psest_0715 0.74 -2.1 784,432 - Psest_0715 0.74 -0.9 784,432 - Psest_0715 0.74 -1.6 784,432 - Psest_0715 0.74 -1.8 784,432 - Psest_0715 0.74 -2.0 784,572 + Psest_0715 0.85 +0.4 784,572 + Psest_0715 0.85 -1.1 784,572 + Psest_0715 0.85 -0.7 784,572 + Psest_0715 0.85 -0.8 784,572 + Psest_0715 0.85 +0.9 784,573 - Psest_0715 0.85 -2.0 784,573 - Psest_0715 0.85 -0.6 784,573 - Psest_0715 0.85 -2.0 784,573 - Psest_0715 0.85 -1.3 784,573 - Psest_0715 0.85 +0.1 784,573 - Psest_0715 0.85 -2.0 784,573 - Psest_0715 0.85 -0.8 784,573 - Psest_0715 0.85 -0.9 784,573 - Psest_0715 0.85 -3.4 784,573 - Psest_0715 0.85 +2.0 784,573 - Psest_0715 0.85 -0.2 784,573 - Psest_0715 0.85 -0.9 784,573 - Psest_0715 0.85 -0.8 784,573 - Psest_0715 0.85 -0.6 784,749 - -0.5 784,778 + +0.1 784,778 + +0.1 784,778 + -0.8 784,778 + -0.7 784,778 + -1.3 784,779 - -0.7 784,779 - +1.0 784,779 - +0.0 784,779 - +2.2 784,946 + Psest_0716 0.73 -1.7 784,946 + Psest_0716 0.73 -2.5 784,947 - Psest_0716 0.74 +0.8 784,947 - Psest_0716 0.74 -0.1 784,992 + +0.2 785,021 + +1.4 785,021 + -0.5 785,021 + -1.5 785,021 + +0.5 785,021 + -0.9 785,022 - -0.6 785,022 - -0.5 785,022 - +0.6 785,022 - +1.6 785,022 - -0.2 785,022 - -0.2 785,022 - -0.4 785,025 + -1.5 785,026 - +1.3 785,026 - +2.2 785,277 + -0.1 785,277 + +1.6 785,277 + +1.4 785,277 + +1.6 785,277 + +1.6 785,277 + +2.0 785,277 + +2.0 785,277 + +0.4 785,277 + +1.7 785,277 + +1.4 785,277 + +1.8 785,277 + +2.2 785,277 + +2.3 785,278 - +1.4 785,278 - +1.4 785,278 - +1.8 785,278 - +2.7 785,278 - +2.0 785,717 + Psest_0717 0.27 +0.8 785,737 + Psest_0717 0.28 +1.9 785,737 + Psest_0717 0.28 -0.3 785,737 + Psest_0717 0.28 -1.0 785,738 - Psest_0717 0.28 +1.1 785,738 - Psest_0717 0.28 -1.7 785,738 - Psest_0717 0.28 +1.5 785,738 - Psest_0717 0.28 +1.0 785,738 - Psest_0717 0.28 +3.6 785,738 - Psest_0717 0.28 +0.3 785,738 - Psest_0717 0.28 +1.6 785,738 - Psest_0717 0.28 -0.8 785,738 - Psest_0717 0.28 +1.8 785,738 - Psest_0717 0.28 +1.8 785,738 - Psest_0717 0.28 +0.8 785,738 - Psest_0717 0.28 -1.3
Or see this region's nucleotide sequence