Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0047 and Psest_0048 are separated by 407 nucleotides Psest_0048 and Psest_0049 are separated by 186 nucleotides Psest_0049 and Psest_0050 are separated by 155 nucleotides
Psest_0047: Psest_0047 - Predicted esterase of the alpha-beta hydrolase superfamily, at 49,298 to 50,521
_0047
Psest_0048: Psest_0048 - ABC-type multidrug transport system, ATPase and permease components, at 50,929 to 52,764
_0048
Psest_0049: Psest_0049 - Uncharacterized conserved protein, at 52,951 to 53,556
_0049
Psest_0050: Psest_0050 - Predicted acetyltransferase, at 53,712 to 53,993
_0050
Position (kb) 50
51
52
53 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 49.958 kb on + strand, within Psest_0047 at 49.958 kb on + strand, within Psest_0047 at 50.028 kb on + strand, within Psest_0047 at 50.028 kb on + strand, within Psest_0047 at 50.028 kb on + strand, within Psest_0047 at 50.029 kb on - strand, within Psest_0047 at 50.029 kb on - strand, within Psest_0047 at 50.029 kb on - strand, within Psest_0047 at 50.029 kb on - strand, within Psest_0047 at 50.505 kb on - strand at 50.541 kb on + strand at 50.541 kb on + strand at 50.541 kb on + strand at 50.627 kb on - strand at 50.627 kb on - strand at 50.639 kb on + strand at 50.639 kb on + strand at 50.639 kb on + strand at 50.640 kb on - strand at 50.732 kb on - strand at 50.855 kb on - strand at 50.887 kb on - strand at 51.013 kb on + strand at 51.013 kb on + strand at 51.013 kb on + strand at 51.013 kb on + strand at 51.013 kb on + strand at 51.014 kb on - strand at 51.014 kb on - strand at 51.022 kb on + strand at 51.022 kb on + strand at 51.023 kb on - strand at 51.023 kb on - strand at 51.304 kb on + strand, within Psest_0048 at 51.304 kb on + strand, within Psest_0048 at 51.305 kb on - strand, within Psest_0048 at 51.439 kb on + strand, within Psest_0048 at 51.439 kb on + strand, within Psest_0048 at 51.439 kb on + strand, within Psest_0048 at 51.440 kb on - strand, within Psest_0048 at 51.440 kb on - strand, within Psest_0048 at 51.457 kb on + strand, within Psest_0048 at 51.457 kb on + strand, within Psest_0048 at 51.457 kb on + strand, within Psest_0048 at 51.457 kb on + strand, within Psest_0048 at 51.458 kb on - strand, within Psest_0048 at 51.458 kb on - strand, within Psest_0048 at 51.458 kb on - strand, within Psest_0048 at 51.458 kb on - strand, within Psest_0048 at 51.458 kb on - strand, within Psest_0048 at 51.517 kb on + strand, within Psest_0048 at 51.670 kb on + strand, within Psest_0048 at 52.350 kb on + strand, within Psest_0048 at 52.714 kb on + strand at 52.714 kb on + strand at 52.715 kb on - strand at 52.715 kb on - strand at 52.814 kb on - strand at 52.814 kb on - strand at 52.814 kb on - strand at 52.814 kb on - strand at 52.814 kb on - strand at 52.866 kb on + strand at 52.866 kb on + strand at 52.866 kb on + strand at 52.867 kb on - strand at 52.867 kb on - strand at 52.979 kb on + strand at 52.980 kb on - strand at 52.980 kb on - strand at 53.031 kb on + strand, within Psest_0049 at 53.031 kb on + strand, within Psest_0049 at 53.031 kb on + strand, within Psest_0049 at 53.031 kb on + strand, within Psest_0049 at 53.031 kb on + strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.032 kb on - strand, within Psest_0049 at 53.054 kb on + strand, within Psest_0049 at 53.054 kb on + strand, within Psest_0049 at 53.055 kb on - strand, within Psest_0049 at 53.055 kb on - strand, within Psest_0049 at 53.055 kb on - strand, within Psest_0049 at 53.055 kb on - strand, within Psest_0049 at 53.055 kb on - strand, within Psest_0049 at 53.055 kb on - strand, within Psest_0049 at 53.108 kb on + strand, within Psest_0049 at 53.108 kb on + strand, within Psest_0049 at 53.109 kb on - strand, within Psest_0049 at 53.109 kb on - strand, within Psest_0049 at 53.109 kb on - strand, within Psest_0049 at 53.109 kb on - strand, within Psest_0049 at 53.113 kb on - strand, within Psest_0049 at 53.113 kb on - strand, within Psest_0049 at 53.113 kb on - strand, within Psest_0049 at 53.113 kb on - strand, within Psest_0049 at 53.131 kb on + strand, within Psest_0049 at 53.131 kb on + strand, within Psest_0049 at 53.131 kb on + strand, within Psest_0049 at 53.132 kb on - strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.147 kb on + strand, within Psest_0049 at 53.148 kb on - strand, within Psest_0049 at 53.148 kb on - strand, within Psest_0049 at 53.148 kb on - strand, within Psest_0049 at 53.148 kb on - strand, within Psest_0049 at 53.148 kb on - strand, within Psest_0049 at 53.148 kb on - strand, within Psest_0049 at 53.148 kb on - strand, within Psest_0049 at 53.148 kb on - strand, within Psest_0049 at 53.148 kb on - strand, within Psest_0049 at 53.148 kb on - strand, within Psest_0049 at 53.148 kb on - strand, within Psest_0049 at 53.148 kb on - strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.149 kb on + strand, within Psest_0049 at 53.150 kb on - strand, within Psest_0049 at 53.150 kb on - strand, within Psest_0049 at 53.150 kb on - strand, within Psest_0049 at 53.150 kb on - strand, within Psest_0049 at 53.150 kb on - strand, within Psest_0049 at 53.211 kb on + strand, within Psest_0049 at 53.211 kb on + strand, within Psest_0049 at 53.211 kb on + strand, within Psest_0049 at 53.211 kb on + strand, within Psest_0049 at 53.211 kb on + strand, within Psest_0049 at 53.212 kb on - strand, within Psest_0049 at 53.212 kb on - strand, within Psest_0049 at 53.212 kb on - strand, within Psest_0049 at 53.212 kb on - strand, within Psest_0049 at 53.212 kb on - strand, within Psest_0049 at 53.212 kb on - strand, within Psest_0049 at 53.212 kb on - strand, within Psest_0049 at 53.212 kb on - strand, within Psest_0049 at 53.212 kb on - strand, within Psest_0049 at 53.212 kb on - strand, within Psest_0049 at 53.284 kb on + strand, within Psest_0049 at 53.284 kb on + strand, within Psest_0049 at 53.284 kb on + strand, within Psest_0049 at 53.284 kb on + strand, within Psest_0049 at 53.284 kb on + strand, within Psest_0049 at 53.284 kb on + strand, within Psest_0049 at 53.284 kb on + strand, within Psest_0049 at 53.284 kb on + strand, within Psest_0049 at 53.284 kb on + strand, within Psest_0049 at 53.284 kb on + strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.285 kb on - strand, within Psest_0049 at 53.286 kb on + strand, within Psest_0049 at 53.286 kb on + strand, within Psest_0049 at 53.286 kb on + strand, within Psest_0049 at 53.287 kb on - strand, within Psest_0049 at 53.287 kb on - strand, within Psest_0049 at 53.287 kb on - strand, within Psest_0049 at 53.287 kb on - strand, within Psest_0049 at 53.287 kb on - strand, within Psest_0049 at 53.361 kb on + strand, within Psest_0049 at 53.362 kb on - strand, within Psest_0049 at 53.362 kb on - strand, within Psest_0049 at 53.596 kb on - strand at 53.659 kb on + strand at 53.659 kb on + strand at 53.659 kb on + strand at 53.660 kb on - strand at 53.660 kb on - strand at 53.676 kb on + strand at 53.676 kb on + strand at 53.676 kb on + strand at 53.677 kb on - strand at 53.761 kb on - strand, within Psest_0050
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 49,958 + Psest_0047 0.54 -0.2 49,958 + Psest_0047 0.54 -1.7 50,028 + Psest_0047 0.60 +1.4 50,028 + Psest_0047 0.60 -0.0 50,028 + Psest_0047 0.60 +0.8 50,029 - Psest_0047 0.60 +0.0 50,029 - Psest_0047 0.60 +1.7 50,029 - Psest_0047 0.60 +1.8 50,029 - Psest_0047 0.60 -0.8 50,505 - +0.6 50,541 + -0.3 50,541 + -2.2 50,541 + -0.5 50,627 - -0.2 50,627 - -1.2 50,639 + -0.2 50,639 + -3.1 50,639 + -1.0 50,640 - +2.1 50,732 - -0.5 50,855 - -2.0 50,887 - -2.9 51,013 + -1.5 51,013 + +0.2 51,013 + -0.4 51,013 + -1.7 51,013 + -0.5 51,014 - -1.0 51,014 - -0.2 51,022 + +1.6 51,022 + -0.9 51,023 - +1.8 51,023 - -0.8 51,304 + Psest_0048 0.20 +0.5 51,304 + Psest_0048 0.20 -0.5 51,305 - Psest_0048 0.20 -0.2 51,439 + Psest_0048 0.28 +0.5 51,439 + Psest_0048 0.28 -0.3 51,439 + Psest_0048 0.28 -0.2 51,440 - Psest_0048 0.28 -1.4 51,440 - Psest_0048 0.28 -0.2 51,457 + Psest_0048 0.29 -1.2 51,457 + Psest_0048 0.29 -0.3 51,457 + Psest_0048 0.29 +0.8 51,457 + Psest_0048 0.29 -2.0 51,458 - Psest_0048 0.29 +0.1 51,458 - Psest_0048 0.29 -1.3 51,458 - Psest_0048 0.29 -1.5 51,458 - Psest_0048 0.29 -1.8 51,458 - Psest_0048 0.29 +2.2 51,517 + Psest_0048 0.32 -0.8 51,670 + Psest_0048 0.40 -1.0 52,350 + Psest_0048 0.77 +2.8 52,714 + -0.2 52,714 + +1.8 52,715 - -1.8 52,715 - -0.6 52,814 - +2.0 52,814 - -1.8 52,814 - -1.9 52,814 - -1.0 52,814 - -0.8 52,866 + -1.1 52,866 + -1.8 52,866 + -1.9 52,867 - -0.8 52,867 - -1.0 52,979 + -0.1 52,980 - +0.0 52,980 - -0.5 53,031 + Psest_0049 0.13 +0.3 53,031 + Psest_0049 0.13 -1.1 53,031 + Psest_0049 0.13 -0.4 53,031 + Psest_0049 0.13 -0.2 53,031 + Psest_0049 0.13 -0.2 53,032 - Psest_0049 0.13 -0.5 53,032 - Psest_0049 0.13 -0.8 53,032 - Psest_0049 0.13 -0.1 53,032 - Psest_0049 0.13 +0.8 53,032 - Psest_0049 0.13 +3.1 53,032 - Psest_0049 0.13 +0.7 53,032 - Psest_0049 0.13 +0.7 53,032 - Psest_0049 0.13 +1.8 53,032 - Psest_0049 0.13 -1.1 53,032 - Psest_0049 0.13 -0.2 53,032 - Psest_0049 0.13 +3.8 53,032 - Psest_0049 0.13 +1.4 53,032 - Psest_0049 0.13 +1.6 53,032 - Psest_0049 0.13 +0.6 53,054 + Psest_0049 0.17 -3.0 53,054 + Psest_0049 0.17 -2.0 53,055 - Psest_0049 0.17 -2.9 53,055 - Psest_0049 0.17 -0.9 53,055 - Psest_0049 0.17 -1.0 53,055 - Psest_0049 0.17 -0.9 53,055 - Psest_0049 0.17 +1.2 53,055 - Psest_0049 0.17 -1.2 53,108 + Psest_0049 0.26 +0.0 53,108 + Psest_0049 0.26 +0.2 53,109 - Psest_0049 0.26 +1.2 53,109 - Psest_0049 0.26 -0.2 53,109 - Psest_0049 0.26 -0.7 53,109 - Psest_0049 0.26 +2.2 53,113 - Psest_0049 0.27 -0.8 53,113 - Psest_0049 0.27 -1.4 53,113 - Psest_0049 0.27 -0.2 53,113 - Psest_0049 0.27 -0.2 53,131 + Psest_0049 0.30 -0.3 53,131 + Psest_0049 0.30 -1.4 53,131 + Psest_0049 0.30 -1.2 53,132 - Psest_0049 0.30 +0.3 53,147 + Psest_0049 0.32 -1.5 53,147 + Psest_0049 0.32 +1.8 53,147 + Psest_0049 0.32 +1.2 53,147 + Psest_0049 0.32 +0.6 53,147 + Psest_0049 0.32 -0.1 53,147 + Psest_0049 0.32 -1.2 53,147 + Psest_0049 0.32 +0.3 53,147 + Psest_0049 0.32 -0.8 53,147 + Psest_0049 0.32 -0.5 53,147 + Psest_0049 0.32 -0.2 53,147 + Psest_0049 0.32 -1.1 53,147 + Psest_0049 0.32 -0.6 53,147 + Psest_0049 0.32 -1.2 53,147 + Psest_0049 0.32 -1.2 53,147 + Psest_0049 0.32 -0.2 53,147 + Psest_0049 0.32 -0.6 53,148 - Psest_0049 0.33 +2.0 53,148 - Psest_0049 0.33 +1.2 53,148 - Psest_0049 0.33 -1.0 53,148 - Psest_0049 0.33 -1.2 53,148 - Psest_0049 0.33 +0.8 53,148 - Psest_0049 0.33 -0.2 53,148 - Psest_0049 0.33 +2.7 53,148 - Psest_0049 0.33 -0.5 53,148 - Psest_0049 0.33 -0.5 53,148 - Psest_0049 0.33 -1.5 53,148 - Psest_0049 0.33 -1.1 53,148 - Psest_0049 0.33 -0.5 53,149 + Psest_0049 0.33 -0.2 53,149 + Psest_0049 0.33 -1.8 53,149 + Psest_0049 0.33 +0.7 53,149 + Psest_0049 0.33 -0.5 53,149 + Psest_0049 0.33 -1.4 53,149 + Psest_0049 0.33 -1.4 53,149 + Psest_0049 0.33 +2.2 53,149 + Psest_0049 0.33 -3.1 53,149 + Psest_0049 0.33 -0.2 53,149 + Psest_0049 0.33 +0.8 53,149 + Psest_0049 0.33 -0.9 53,149 + Psest_0049 0.33 +0.9 53,149 + Psest_0049 0.33 +1.1 53,149 + Psest_0049 0.33 +0.0 53,149 + Psest_0049 0.33 -1.2 53,150 - Psest_0049 0.33 -0.8 53,150 - Psest_0049 0.33 -0.2 53,150 - Psest_0049 0.33 -1.3 53,150 - Psest_0049 0.33 -2.8 53,150 - Psest_0049 0.33 -0.5 53,211 + Psest_0049 0.43 -2.2 53,211 + Psest_0049 0.43 -0.2 53,211 + Psest_0049 0.43 +0.4 53,211 + Psest_0049 0.43 -1.0 53,211 + Psest_0049 0.43 -2.0 53,212 - Psest_0049 0.43 +1.5 53,212 - Psest_0049 0.43 -1.7 53,212 - Psest_0049 0.43 +1.8 53,212 - Psest_0049 0.43 +0.7 53,212 - Psest_0049 0.43 +0.5 53,212 - Psest_0049 0.43 -0.4 53,212 - Psest_0049 0.43 +0.3 53,212 - Psest_0049 0.43 -1.7 53,212 - Psest_0049 0.43 +1.6 53,212 - Psest_0049 0.43 -0.2 53,284 + Psest_0049 0.55 -0.2 53,284 + Psest_0049 0.55 +1.1 53,284 + Psest_0049 0.55 -0.2 53,284 + Psest_0049 0.55 -0.0 53,284 + Psest_0049 0.55 -1.4 53,284 + Psest_0049 0.55 -1.4 53,284 + Psest_0049 0.55 +0.5 53,284 + Psest_0049 0.55 -1.0 53,284 + Psest_0049 0.55 -2.5 53,284 + Psest_0049 0.55 +0.4 53,285 - Psest_0049 0.55 -2.2 53,285 - Psest_0049 0.55 +0.8 53,285 - Psest_0049 0.55 +0.6 53,285 - Psest_0049 0.55 -1.0 53,285 - Psest_0049 0.55 -2.0 53,285 - Psest_0049 0.55 -0.9 53,285 - Psest_0049 0.55 -1.0 53,285 - Psest_0049 0.55 +0.2 53,285 - Psest_0049 0.55 -2.7 53,285 - Psest_0049 0.55 -3.3 53,285 - Psest_0049 0.55 -2.0 53,285 - Psest_0049 0.55 -1.9 53,285 - Psest_0049 0.55 -2.5 53,286 + Psest_0049 0.55 -0.2 53,286 + Psest_0049 0.55 +0.5 53,286 + Psest_0049 0.55 -1.0 53,287 - Psest_0049 0.55 -1.4 53,287 - Psest_0049 0.55 -1.4 53,287 - Psest_0049 0.55 -2.2 53,287 - Psest_0049 0.55 -1.2 53,287 - Psest_0049 0.55 +0.2 53,361 + Psest_0049 0.68 -1.5 53,362 - Psest_0049 0.68 +0.3 53,362 - Psest_0049 0.68 -2.3 53,596 - -2.1 53,659 + +0.6 53,659 + -0.3 53,659 + +0.2 53,660 - -1.7 53,660 - +0.2 53,676 + -0.9 53,676 + +0.2 53,676 + -0.6 53,677 - +1.5 53,761 - Psest_0050 0.17 -1.1
Or see this region's nucleotide sequence