Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3971 and Psest_3972 overlap by 1 nucleotides Psest_3972 and Psest_3973 overlap by 4 nucleotides Psest_3973 and Psest_3974 overlap by 4 nucleotides
Psest_3971: Psest_3971 - Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor), at 4,139,368 to 4,140,216
_3971
Psest_3972: Psest_3972 - Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor), at 4,140,216 to 4,140,578
_3972
Psest_3973: Psest_3973 - Anti-sigma regulatory factor (Ser/Thr protein kinase), at 4,140,575 to 4,140,979
_3973
Psest_3974: Psest_3974 - Anti-sigma regulatory factor (Ser/Thr protein kinase), at 4,140,976 to 4,141,986
_3974
Psest_3975: Psest_3975 - Signal transduction histidine kinase, at 4,141,979 to 4,142,851
_3975
Position (kb)
4140
4141 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 4139.588 kb on - strand, within Psest_3971 at 4139.588 kb on - strand, within Psest_3971 at 4139.588 kb on - strand, within Psest_3971 at 4139.699 kb on - strand, within Psest_3971 at 4139.699 kb on - strand, within Psest_3971 at 4139.770 kb on + strand, within Psest_3971 at 4139.770 kb on + strand, within Psest_3971 at 4139.770 kb on + strand, within Psest_3971 at 4139.770 kb on + strand, within Psest_3971 at 4139.771 kb on - strand, within Psest_3971 at 4139.771 kb on - strand, within Psest_3971 at 4139.771 kb on - strand, within Psest_3971 at 4139.771 kb on - strand, within Psest_3971 at 4139.771 kb on - strand, within Psest_3971 at 4139.771 kb on - strand, within Psest_3971 at 4139.771 kb on - strand, within Psest_3971 at 4139.771 kb on - strand, within Psest_3971 at 4139.771 kb on - strand, within Psest_3971 at 4140.083 kb on + strand, within Psest_3971 at 4140.083 kb on + strand, within Psest_3971 at 4140.084 kb on - strand, within Psest_3971 at 4140.136 kb on - strand at 4140.136 kb on - strand at 4140.215 kb on - strand at 4140.227 kb on - strand at 4140.725 kb on - strand, within Psest_3973 at 4140.956 kb on - strand at 4140.956 kb on - strand at 4140.956 kb on - strand at 4141.698 kb on + strand, within Psest_3974 at 4141.699 kb on - strand, within Psest_3974 at 4141.766 kb on + strand, within Psest_3974 at 4141.766 kb on + strand, within Psest_3974 at 4141.826 kb on + strand, within Psest_3974 at 4141.826 kb on + strand, within Psest_3974 at 4141.826 kb on + strand, within Psest_3974 at 4141.827 kb on - strand, within Psest_3974 at 4141.828 kb on + strand, within Psest_3974 at 4141.828 kb on + strand, within Psest_3974 at 4141.828 kb on + strand, within Psest_3974 at 4141.828 kb on + strand, within Psest_3974 at 4141.829 kb on - strand, within Psest_3974 at 4141.829 kb on - strand, within Psest_3974 at 4141.829 kb on - strand, within Psest_3974 at 4141.829 kb on - strand, within Psest_3974 at 4141.829 kb on - strand, within Psest_3974 at 4141.880 kb on + strand, within Psest_3974 at 4141.881 kb on - strand, within Psest_3974 at 4141.881 kb on - strand, within Psest_3974 at 4141.952 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 4,139,588 - Psest_3971 0.26 -0.9 4,139,588 - Psest_3971 0.26 +0.2 4,139,588 - Psest_3971 0.26 -2.1 4,139,699 - Psest_3971 0.39 +1.7 4,139,699 - Psest_3971 0.39 -0.9 4,139,770 + Psest_3971 0.47 +1.4 4,139,770 + Psest_3971 0.47 +2.4 4,139,770 + Psest_3971 0.47 +1.0 4,139,770 + Psest_3971 0.47 -1.4 4,139,771 - Psest_3971 0.47 +1.4 4,139,771 - Psest_3971 0.47 -0.1 4,139,771 - Psest_3971 0.47 +1.0 4,139,771 - Psest_3971 0.47 +0.7 4,139,771 - Psest_3971 0.47 +1.2 4,139,771 - Psest_3971 0.47 +1.0 4,139,771 - Psest_3971 0.47 +1.7 4,139,771 - Psest_3971 0.47 +0.4 4,139,771 - Psest_3971 0.47 +0.1 4,140,083 + Psest_3971 0.84 -1.6 4,140,083 + Psest_3971 0.84 -0.4 4,140,084 - Psest_3971 0.84 -0.3 4,140,136 - +0.9 4,140,136 - +2.3 4,140,215 - +0.8 4,140,227 - +2.2 4,140,725 - Psest_3973 0.37 +1.3 4,140,956 - +2.0 4,140,956 - +0.6 4,140,956 - -1.6 4,141,698 + Psest_3974 0.71 +1.6 4,141,699 - Psest_3974 0.72 +1.3 4,141,766 + Psest_3974 0.78 +2.4 4,141,766 + Psest_3974 0.78 +3.2 4,141,826 + Psest_3974 0.84 +1.4 4,141,826 + Psest_3974 0.84 +5.0 4,141,826 + Psest_3974 0.84 +2.3 4,141,827 - Psest_3974 0.84 +1.5 4,141,828 + Psest_3974 0.84 +2.7 4,141,828 + Psest_3974 0.84 -1.6 4,141,828 + Psest_3974 0.84 +3.2 4,141,828 + Psest_3974 0.84 +2.5 4,141,829 - Psest_3974 0.84 -0.9 4,141,829 - Psest_3974 0.84 -1.0 4,141,829 - Psest_3974 0.84 -1.7 4,141,829 - Psest_3974 0.84 -0.0 4,141,829 - Psest_3974 0.84 -1.6 4,141,880 + Psest_3974 0.89 +2.1 4,141,881 - Psest_3974 0.90 -0.5 4,141,881 - Psest_3974 0.90 -0.0 4,141,952 + +0.4
Or see this region's nucleotide sequence