Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3675 and Psest_3676 are separated by 6 nucleotides Psest_3676 and Psest_3677 overlap by 10 nucleotides Psest_3677 and Psest_3678 are separated by 75 nucleotides
Psest_3675: Psest_3675 - tRNA nucleotidyltransferase/poly(A) polymerase, at 3,840,178 to 3,841,347
_3675
Psest_3676: Psest_3676 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, at 3,841,354 to 3,841,896
_3676
Psest_3677: Psest_3677 - dihydroneopterin aldolase, at 3,841,887 to 3,842,240
_3677
Psest_3678: Psest_3678 - acyl-phosphate glycerol 3-phosphate acyltransferase, at 3,842,316 to 3,842,885
_3678
Position (kb)
3841
3842 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3841.325 kb on - strand at 3841.325 kb on - strand at 3841.325 kb on - strand at 3841.345 kb on + strand at 3841.345 kb on + strand at 3841.345 kb on + strand at 3841.346 kb on - strand at 3841.346 kb on - strand at 3841.346 kb on - strand at 3841.346 kb on - strand at 3841.346 kb on - strand at 3841.465 kb on + strand, within Psest_3676 at 3842.441 kb on + strand, within Psest_3678 at 3842.441 kb on + strand, within Psest_3678 at 3842.441 kb on + strand, within Psest_3678 at 3842.441 kb on + strand, within Psest_3678 at 3842.441 kb on + strand, within Psest_3678 at 3842.441 kb on + strand, within Psest_3678 at 3842.516 kb on - strand, within Psest_3678 at 3842.601 kb on + strand, within Psest_3678 at 3842.602 kb on - strand, within Psest_3678 at 3842.822 kb on + strand, within Psest_3678 at 3842.822 kb on + strand, within Psest_3678 at 3842.823 kb on - strand, within Psest_3678 at 3842.823 kb on - strand, within Psest_3678 at 3842.823 kb on - strand, within Psest_3678
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 3,841,325 - +0.2 3,841,325 - +0.1 3,841,325 - +0.0 3,841,345 + +0.5 3,841,345 + +0.1 3,841,345 + -0.8 3,841,346 - +0.1 3,841,346 - -0.4 3,841,346 - -2.2 3,841,346 - -0.3 3,841,346 - +2.5 3,841,465 + Psest_3676 0.20 +2.1 3,842,441 + Psest_3678 0.22 +1.4 3,842,441 + Psest_3678 0.22 +1.6 3,842,441 + Psest_3678 0.22 -0.3 3,842,441 + Psest_3678 0.22 +1.9 3,842,441 + Psest_3678 0.22 -1.0 3,842,441 + Psest_3678 0.22 +1.0 3,842,516 - Psest_3678 0.35 +1.1 3,842,601 + Psest_3678 0.50 +2.1 3,842,602 - Psest_3678 0.50 -0.2 3,842,822 + Psest_3678 0.89 -0.3 3,842,822 + Psest_3678 0.89 -0.3 3,842,823 - Psest_3678 0.89 -1.5 3,842,823 - Psest_3678 0.89 -0.3 3,842,823 - Psest_3678 0.89 -0.4
Or see this region's nucleotide sequence