Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3456 and Psest_3457 overlap by 8 nucleotides Psest_3457 and Psest_3458 overlap by 4 nucleotides Psest_3458 and Psest_3459 are separated by 92 nucleotides Psest_3459 and Psest_3460 are separated by 13 nucleotides
Psest_3456: Psest_3456 - RNA polymerase sigma factor, sigma-70 family, at 3,628,078 to 3,628,638
_3456
Psest_3457: Psest_3457 - hypothetical protein, at 3,628,631 to 3,629,056
_3457
Psest_3458: Psest_3458 - hypothetical protein, at 3,629,053 to 3,629,517
_3458
Psest_3459: Psest_3459 - hypothetical protein, at 3,629,610 to 3,630,092
_3459
Psest_3460: Psest_3460 - Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily, at 3,630,106 to 3,632,232
_3460
Position (kb)
3629
3630 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3628.517 kb on - strand, within Psest_3456 at 3628.517 kb on - strand, within Psest_3456 at 3628.517 kb on - strand, within Psest_3456 at 3628.668 kb on - strand at 3628.668 kb on - strand at 3629.033 kb on + strand at 3629.044 kb on - strand at 3629.044 kb on - strand at 3629.061 kb on + strand at 3629.255 kb on - strand, within Psest_3458 at 3629.358 kb on + strand, within Psest_3458 at 3629.358 kb on + strand, within Psest_3458 at 3629.358 kb on + strand, within Psest_3458 at 3629.358 kb on + strand, within Psest_3458 at 3629.359 kb on - strand, within Psest_3458 at 3629.359 kb on - strand, within Psest_3458 at 3629.359 kb on - strand, within Psest_3458 at 3629.359 kb on - strand, within Psest_3458 at 3629.359 kb on - strand, within Psest_3458 at 3629.560 kb on + strand at 3629.895 kb on + strand, within Psest_3459 at 3629.895 kb on + strand, within Psest_3459 at 3629.896 kb on - strand, within Psest_3459 at 3629.896 kb on - strand, within Psest_3459 at 3629.896 kb on - strand, within Psest_3459 at 3629.896 kb on - strand, within Psest_3459 at 3629.896 kb on - strand, within Psest_3459 at 3629.896 kb on - strand, within Psest_3459 at 3629.966 kb on - strand, within Psest_3459 at 3630.054 kb on + strand at 3630.054 kb on + strand at 3630.055 kb on - strand at 3630.320 kb on + strand, within Psest_3460 at 3630.320 kb on + strand, within Psest_3460
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 3,628,517 - Psest_3456 0.78 +1.0 3,628,517 - Psest_3456 0.78 +2.2 3,628,517 - Psest_3456 0.78 +1.0 3,628,668 - +1.1 3,628,668 - -1.3 3,629,033 + -0.3 3,629,044 - +0.4 3,629,044 - +0.4 3,629,061 + +0.7 3,629,255 - Psest_3458 0.43 +1.0 3,629,358 + Psest_3458 0.66 +3.0 3,629,358 + Psest_3458 0.66 +2.6 3,629,358 + Psest_3458 0.66 +1.0 3,629,358 + Psest_3458 0.66 +1.0 3,629,359 - Psest_3458 0.66 +2.7 3,629,359 - Psest_3458 0.66 +2.0 3,629,359 - Psest_3458 0.66 +2.8 3,629,359 - Psest_3458 0.66 +0.4 3,629,359 - Psest_3458 0.66 +3.0 3,629,560 + +1.0 3,629,895 + Psest_3459 0.59 +1.6 3,629,895 + Psest_3459 0.59 +0.4 3,629,896 - Psest_3459 0.59 +0.4 3,629,896 - Psest_3459 0.59 +2.0 3,629,896 - Psest_3459 0.59 +0.4 3,629,896 - Psest_3459 0.59 +0.4 3,629,896 - Psest_3459 0.59 -0.3 3,629,896 - Psest_3459 0.59 +1.2 3,629,966 - Psest_3459 0.74 +1.3 3,630,054 + +0.4 3,630,054 + +1.2 3,630,055 - +0.7 3,630,320 + Psest_3460 0.10 -0.2 3,630,320 + Psest_3460 0.10 +2.0
Or see this region's nucleotide sequence