Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3345 and Psest_3346 are separated by 142 nucleotides Psest_3346 and Psest_3347 are separated by 287 nucleotides
Psest_3345: Psest_3345 - Sulfite reductase, alpha subunit (flavoprotein), at 3,510,154 to 3,511,680
_3345
Psest_3346: Psest_3346 - TonB-dependent siderophore receptor, at 3,511,823 to 3,513,895
_3346
Psest_3347: Psest_3347 - TonB-dependent siderophore receptor, at 3,514,183 to 3,516,441
_3347
Position (kb)
3511
3512
3513
3514 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3510.839 kb on + strand, within Psest_3345 at 3511.093 kb on + strand, within Psest_3345 at 3511.094 kb on - strand, within Psest_3345 at 3511.191 kb on - strand, within Psest_3345 at 3511.489 kb on + strand, within Psest_3345 at 3511.489 kb on + strand, within Psest_3345 at 3511.489 kb on + strand, within Psest_3345 at 3511.490 kb on - strand, within Psest_3345 at 3511.490 kb on - strand, within Psest_3345 at 3511.490 kb on - strand, within Psest_3345 at 3511.490 kb on - strand, within Psest_3345 at 3511.526 kb on + strand, within Psest_3345 at 3511.526 kb on + strand, within Psest_3345 at 3511.526 kb on + strand, within Psest_3345 at 3511.526 kb on + strand, within Psest_3345 at 3511.526 kb on + strand, within Psest_3345 at 3511.526 kb on + strand, within Psest_3345 at 3511.526 kb on + strand, within Psest_3345 at 3511.526 kb on + strand, within Psest_3345 at 3511.526 kb on + strand, within Psest_3345 at 3511.527 kb on - strand, within Psest_3345 at 3511.527 kb on - strand, within Psest_3345 at 3511.558 kb on + strand at 3511.558 kb on + strand at 3511.558 kb on + strand at 3511.558 kb on + strand at 3511.558 kb on + strand at 3511.559 kb on - strand at 3511.559 kb on - strand at 3511.559 kb on - strand at 3511.559 kb on - strand at 3511.559 kb on - strand at 3511.559 kb on - strand at 3511.559 kb on - strand at 3511.559 kb on - strand at 3511.559 kb on - strand at 3511.604 kb on + strand at 3511.604 kb on + strand at 3511.676 kb on - strand at 3511.676 kb on - strand at 3511.676 kb on - strand at 3511.709 kb on + strand at 3511.797 kb on - strand at 3511.833 kb on - strand at 3511.833 kb on - strand at 3511.833 kb on - strand at 3511.902 kb on + strand at 3511.902 kb on + strand at 3511.905 kb on + strand at 3511.906 kb on - strand at 3511.906 kb on - strand at 3511.966 kb on - strand at 3511.969 kb on - strand at 3512.028 kb on + strand at 3512.028 kb on + strand at 3512.028 kb on + strand at 3512.029 kb on - strand at 3512.029 kb on - strand at 3512.293 kb on + strand, within Psest_3346 at 3512.294 kb on - strand, within Psest_3346 at 3512.457 kb on + strand, within Psest_3346 at 3512.457 kb on + strand, within Psest_3346 at 3512.457 kb on + strand, within Psest_3346 at 3512.457 kb on + strand, within Psest_3346 at 3512.457 kb on + strand, within Psest_3346 at 3512.457 kb on + strand, within Psest_3346 at 3512.458 kb on - strand, within Psest_3346 at 3512.478 kb on + strand, within Psest_3346 at 3512.505 kb on + strand, within Psest_3346 at 3512.588 kb on + strand, within Psest_3346 at 3512.589 kb on - strand, within Psest_3346 at 3512.678 kb on - strand, within Psest_3346 at 3512.715 kb on + strand, within Psest_3346 at 3512.715 kb on + strand, within Psest_3346 at 3512.715 kb on + strand, within Psest_3346 at 3512.717 kb on + strand, within Psest_3346 at 3512.718 kb on - strand, within Psest_3346 at 3512.828 kb on + strand, within Psest_3346 at 3512.829 kb on - strand, within Psest_3346 at 3512.932 kb on - strand, within Psest_3346 at 3512.991 kb on + strand, within Psest_3346 at 3513.097 kb on - strand, within Psest_3346 at 3513.209 kb on + strand, within Psest_3346 at 3513.210 kb on - strand, within Psest_3346 at 3513.210 kb on - strand, within Psest_3346 at 3513.210 kb on - strand, within Psest_3346 at 3513.393 kb on + strand, within Psest_3346 at 3513.393 kb on + strand, within Psest_3346 at 3513.394 kb on - strand, within Psest_3346 at 3513.394 kb on - strand, within Psest_3346 at 3513.503 kb on + strand, within Psest_3346 at 3513.503 kb on + strand, within Psest_3346 at 3513.503 kb on + strand, within Psest_3346 at 3513.504 kb on - strand, within Psest_3346 at 3513.504 kb on - strand, within Psest_3346 at 3513.523 kb on + strand, within Psest_3346 at 3513.523 kb on + strand, within Psest_3346 at 3513.523 kb on + strand, within Psest_3346 at 3513.523 kb on + strand, within Psest_3346 at 3513.523 kb on + strand, within Psest_3346 at 3513.523 kb on + strand, within Psest_3346 at 3513.524 kb on - strand, within Psest_3346 at 3513.524 kb on - strand, within Psest_3346 at 3513.524 kb on - strand, within Psest_3346 at 3513.524 kb on - strand, within Psest_3346 at 3513.524 kb on - strand, within Psest_3346 at 3513.525 kb on + strand, within Psest_3346 at 3513.525 kb on + strand, within Psest_3346 at 3513.525 kb on + strand, within Psest_3346 at 3513.525 kb on + strand, within Psest_3346 at 3513.525 kb on + strand, within Psest_3346 at 3513.525 kb on + strand, within Psest_3346 at 3513.525 kb on + strand, within Psest_3346 at 3513.525 kb on + strand, within Psest_3346 at 3513.526 kb on - strand, within Psest_3346 at 3513.526 kb on - strand, within Psest_3346 at 3513.526 kb on - strand, within Psest_3346 at 3513.526 kb on - strand, within Psest_3346 at 3513.526 kb on - strand, within Psest_3346 at 3513.527 kb on + strand, within Psest_3346 at 3513.527 kb on + strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.528 kb on - strand, within Psest_3346 at 3513.540 kb on + strand, within Psest_3346 at 3513.540 kb on + strand, within Psest_3346 at 3513.540 kb on + strand, within Psest_3346 at 3513.541 kb on - strand, within Psest_3346 at 3513.541 kb on - strand, within Psest_3346 at 3513.590 kb on - strand, within Psest_3346 at 3513.590 kb on - strand, within Psest_3346 at 3513.600 kb on - strand, within Psest_3346 at 3513.655 kb on - strand, within Psest_3346 at 3513.786 kb on + strand at 3514.019 kb on - strand at 3514.027 kb on + strand at 3514.027 kb on + strand at 3514.027 kb on + strand at 3514.027 kb on + strand at 3514.114 kb on + strand at 3514.115 kb on - strand at 3514.250 kb on + strand at 3514.250 kb on + strand at 3514.251 kb on - strand at 3514.265 kb on + strand at 3514.265 kb on + strand at 3514.265 kb on + strand at 3514.352 kb on + strand at 3514.352 kb on + strand at 3514.353 kb on - strand at 3514.403 kb on + strand at 3514.403 kb on + strand at 3514.403 kb on + strand at 3514.403 kb on + strand at 3514.403 kb on + strand at 3514.403 kb on + strand at 3514.404 kb on - strand at 3514.404 kb on - strand at 3514.404 kb on - strand at 3514.404 kb on - strand at 3514.404 kb on - strand at 3514.404 kb on - strand at 3514.404 kb on - strand at 3514.404 kb on - strand at 3514.404 kb on - strand at 3514.404 kb on - strand at 3514.445 kb on + strand, within Psest_3347 at 3514.445 kb on + strand, within Psest_3347 at 3514.445 kb on + strand, within Psest_3347 at 3514.445 kb on + strand, within Psest_3347 at 3514.445 kb on + strand, within Psest_3347 at 3514.445 kb on + strand, within Psest_3347 at 3514.445 kb on + strand, within Psest_3347 at 3514.445 kb on + strand, within Psest_3347 at 3514.445 kb on + strand, within Psest_3347 at 3514.445 kb on + strand, within Psest_3347 at 3514.445 kb on + strand, within Psest_3347 at 3514.445 kb on + strand, within Psest_3347 at 3514.446 kb on - strand, within Psest_3347 at 3514.446 kb on - strand, within Psest_3347 at 3514.446 kb on - strand, within Psest_3347 at 3514.446 kb on - strand, within Psest_3347 at 3514.446 kb on - strand, within Psest_3347 at 3514.446 kb on - strand, within Psest_3347 at 3514.446 kb on - strand, within Psest_3347 at 3514.446 kb on - strand, within Psest_3347 at 3514.446 kb on - strand, within Psest_3347 at 3514.446 kb on - strand, within Psest_3347 at 3514.502 kb on + strand, within Psest_3347 at 3514.503 kb on - strand, within Psest_3347 at 3514.503 kb on - strand, within Psest_3347 at 3514.503 kb on - strand, within Psest_3347 at 3514.517 kb on + strand, within Psest_3347 at 3514.517 kb on + strand, within Psest_3347 at 3514.517 kb on + strand, within Psest_3347 at 3514.518 kb on - strand, within Psest_3347 at 3514.580 kb on + strand, within Psest_3347 at 3514.580 kb on + strand, within Psest_3347 at 3514.580 kb on + strand, within Psest_3347 at 3514.581 kb on - strand, within Psest_3347 at 3514.581 kb on - strand, within Psest_3347 at 3514.581 kb on - strand, within Psest_3347 at 3514.581 kb on - strand, within Psest_3347 at 3514.586 kb on + strand, within Psest_3347 at 3514.586 kb on + strand, within Psest_3347 at 3514.586 kb on + strand, within Psest_3347 at 3514.586 kb on + strand, within Psest_3347 at 3514.587 kb on - strand, within Psest_3347 at 3514.587 kb on - strand, within Psest_3347 at 3514.587 kb on - strand, within Psest_3347 at 3514.781 kb on + strand, within Psest_3347 at 3514.781 kb on + strand, within Psest_3347 at 3514.781 kb on + strand, within Psest_3347 at 3514.781 kb on + strand, within Psest_3347 at 3514.781 kb on + strand, within Psest_3347 at 3514.785 kb on + strand, within Psest_3347 at 3514.786 kb on - strand, within Psest_3347 at 3514.889 kb on + strand, within Psest_3347 at 3514.890 kb on - strand, within Psest_3347
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 3,510,839 + Psest_3345 0.45 +0.7 3,511,093 + Psest_3345 0.61 +1.9 3,511,094 - Psest_3345 0.62 +0.3 3,511,191 - Psest_3345 0.68 +1.2 3,511,489 + Psest_3345 0.87 -0.1 3,511,489 + Psest_3345 0.87 -0.5 3,511,489 + Psest_3345 0.87 -0.4 3,511,490 - Psest_3345 0.87 +0.8 3,511,490 - Psest_3345 0.87 +2.6 3,511,490 - Psest_3345 0.87 -1.9 3,511,490 - Psest_3345 0.87 -0.7 3,511,526 + Psest_3345 0.90 +0.3 3,511,526 + Psest_3345 0.90 -0.2 3,511,526 + Psest_3345 0.90 -1.1 3,511,526 + Psest_3345 0.90 +0.5 3,511,526 + Psest_3345 0.90 -0.5 3,511,526 + Psest_3345 0.90 +0.1 3,511,526 + Psest_3345 0.90 +0.3 3,511,526 + Psest_3345 0.90 +0.7 3,511,526 + Psest_3345 0.90 -0.4 3,511,527 - Psest_3345 0.90 +0.0 3,511,527 - Psest_3345 0.90 +1.4 3,511,558 + -2.2 3,511,558 + -0.6 3,511,558 + +1.1 3,511,558 + -0.9 3,511,558 + -0.4 3,511,559 - -1.5 3,511,559 - +0.3 3,511,559 - -1.4 3,511,559 - +0.5 3,511,559 - +1.7 3,511,559 - -0.7 3,511,559 - -0.9 3,511,559 - +1.2 3,511,559 - -2.2 3,511,604 + -0.9 3,511,604 + -0.4 3,511,676 - -0.1 3,511,676 - -0.1 3,511,676 - -3.0 3,511,709 + -0.9 3,511,797 - +1.5 3,511,833 - +0.4 3,511,833 - +0.8 3,511,833 - -0.7 3,511,902 + -1.9 3,511,902 + +0.0 3,511,905 + -2.4 3,511,906 - -1.1 3,511,906 - -1.3 3,511,966 - +0.5 3,511,969 - +0.1 3,512,028 + +0.3 3,512,028 + -0.3 3,512,028 + +2.3 3,512,029 - +0.0 3,512,029 - -0.1 3,512,293 + Psest_3346 0.23 -0.5 3,512,294 - Psest_3346 0.23 +1.9 3,512,457 + Psest_3346 0.31 -0.4 3,512,457 + Psest_3346 0.31 +0.5 3,512,457 + Psest_3346 0.31 +0.6 3,512,457 + Psest_3346 0.31 -1.7 3,512,457 + Psest_3346 0.31 -0.5 3,512,457 + Psest_3346 0.31 +3.2 3,512,458 - Psest_3346 0.31 -2.5 3,512,478 + Psest_3346 0.32 -1.6 3,512,505 + Psest_3346 0.33 -0.8 3,512,588 + Psest_3346 0.37 -0.6 3,512,589 - Psest_3346 0.37 -0.6 3,512,678 - Psest_3346 0.41 -1.8 3,512,715 + Psest_3346 0.43 +0.7 3,512,715 + Psest_3346 0.43 -1.3 3,512,715 + Psest_3346 0.43 -1.7 3,512,717 + Psest_3346 0.43 -0.7 3,512,718 - Psest_3346 0.43 +0.2 3,512,828 + Psest_3346 0.48 +1.5 3,512,829 - Psest_3346 0.49 -0.4 3,512,932 - Psest_3346 0.53 -1.7 3,512,991 + Psest_3346 0.56 -0.7 3,513,097 - Psest_3346 0.61 -0.1 3,513,209 + Psest_3346 0.67 -1.5 3,513,210 - Psest_3346 0.67 -2.0 3,513,210 - Psest_3346 0.67 -0.6 3,513,210 - Psest_3346 0.67 -0.3 3,513,393 + Psest_3346 0.76 -2.1 3,513,393 + Psest_3346 0.76 -0.7 3,513,394 - Psest_3346 0.76 -0.7 3,513,394 - Psest_3346 0.76 -0.7 3,513,503 + Psest_3346 0.81 -1.9 3,513,503 + Psest_3346 0.81 -1.3 3,513,503 + Psest_3346 0.81 -0.9 3,513,504 - Psest_3346 0.81 +0.9 3,513,504 - Psest_3346 0.81 -2.0 3,513,523 + Psest_3346 0.82 -0.1 3,513,523 + Psest_3346 0.82 +0.1 3,513,523 + Psest_3346 0.82 +0.3 3,513,523 + Psest_3346 0.82 -0.3 3,513,523 + Psest_3346 0.82 -0.5 3,513,523 + Psest_3346 0.82 -2.1 3,513,524 - Psest_3346 0.82 +0.2 3,513,524 - Psest_3346 0.82 -1.4 3,513,524 - Psest_3346 0.82 +0.3 3,513,524 - Psest_3346 0.82 -0.7 3,513,524 - Psest_3346 0.82 +0.9 3,513,525 + Psest_3346 0.82 -0.6 3,513,525 + Psest_3346 0.82 -0.4 3,513,525 + Psest_3346 0.82 -1.8 3,513,525 + Psest_3346 0.82 -1.1 3,513,525 + Psest_3346 0.82 -0.4 3,513,525 + Psest_3346 0.82 +0.6 3,513,525 + Psest_3346 0.82 -1.0 3,513,525 + Psest_3346 0.82 -1.8 3,513,526 - Psest_3346 0.82 -1.9 3,513,526 - Psest_3346 0.82 +0.2 3,513,526 - Psest_3346 0.82 -0.9 3,513,526 - Psest_3346 0.82 +0.3 3,513,526 - Psest_3346 0.82 +0.7 3,513,527 + Psest_3346 0.82 +1.1 3,513,527 + Psest_3346 0.82 +0.1 3,513,528 - Psest_3346 0.82 +0.3 3,513,528 - Psest_3346 0.82 +1.1 3,513,528 - Psest_3346 0.82 -1.3 3,513,528 - Psest_3346 0.82 +0.9 3,513,528 - Psest_3346 0.82 -2.0 3,513,528 - Psest_3346 0.82 -0.1 3,513,528 - Psest_3346 0.82 -0.0 3,513,528 - Psest_3346 0.82 -1.4 3,513,528 - Psest_3346 0.82 +0.9 3,513,528 - Psest_3346 0.82 -0.9 3,513,528 - Psest_3346 0.82 -1.8 3,513,528 - Psest_3346 0.82 -0.4 3,513,528 - Psest_3346 0.82 -0.9 3,513,528 - Psest_3346 0.82 -0.3 3,513,528 - Psest_3346 0.82 -0.8 3,513,540 + Psest_3346 0.83 -0.9 3,513,540 + Psest_3346 0.83 -1.8 3,513,540 + Psest_3346 0.83 -0.4 3,513,541 - Psest_3346 0.83 -0.4 3,513,541 - Psest_3346 0.83 +0.4 3,513,590 - Psest_3346 0.85 +1.2 3,513,590 - Psest_3346 0.85 +0.2 3,513,600 - Psest_3346 0.86 -0.7 3,513,655 - Psest_3346 0.88 +0.3 3,513,786 + -0.9 3,514,019 - -0.3 3,514,027 + -0.1 3,514,027 + +0.3 3,514,027 + -0.9 3,514,027 + -0.1 3,514,114 + +2.5 3,514,115 - -0.4 3,514,250 + +0.3 3,514,250 + -0.5 3,514,251 - +1.2 3,514,265 + +1.0 3,514,265 + -2.3 3,514,265 + -0.3 3,514,352 + +0.3 3,514,352 + -0.6 3,514,353 - +0.3 3,514,403 + +1.5 3,514,403 + -1.7 3,514,403 + -0.3 3,514,403 + -2.8 3,514,403 + +1.6 3,514,403 + -1.0 3,514,404 - +0.3 3,514,404 - -0.5 3,514,404 - +0.3 3,514,404 - -0.3 3,514,404 - +1.2 3,514,404 - +0.5 3,514,404 - -0.3 3,514,404 - -1.7 3,514,404 - +0.8 3,514,404 - -1.3 3,514,445 + Psest_3347 0.12 -0.5 3,514,445 + Psest_3347 0.12 -0.4 3,514,445 + Psest_3347 0.12 -0.4 3,514,445 + Psest_3347 0.12 -0.1 3,514,445 + Psest_3347 0.12 +0.0 3,514,445 + Psest_3347 0.12 -0.8 3,514,445 + Psest_3347 0.12 -0.2 3,514,445 + Psest_3347 0.12 -0.7 3,514,445 + Psest_3347 0.12 +0.9 3,514,445 + Psest_3347 0.12 -0.1 3,514,445 + Psest_3347 0.12 +0.3 3,514,445 + Psest_3347 0.12 -0.4 3,514,446 - Psest_3347 0.12 +0.9 3,514,446 - Psest_3347 0.12 -1.5 3,514,446 - Psest_3347 0.12 +2.7 3,514,446 - Psest_3347 0.12 -0.9 3,514,446 - Psest_3347 0.12 +0.8 3,514,446 - Psest_3347 0.12 +2.9 3,514,446 - Psest_3347 0.12 -1.1 3,514,446 - Psest_3347 0.12 +0.3 3,514,446 - Psest_3347 0.12 -0.7 3,514,446 - Psest_3347 0.12 +0.9 3,514,502 + Psest_3347 0.14 -0.9 3,514,503 - Psest_3347 0.14 +1.6 3,514,503 - Psest_3347 0.14 +1.4 3,514,503 - Psest_3347 0.14 +1.2 3,514,517 + Psest_3347 0.15 -1.5 3,514,517 + Psest_3347 0.15 -1.5 3,514,517 + Psest_3347 0.15 -1.1 3,514,518 - Psest_3347 0.15 -0.4 3,514,580 + Psest_3347 0.18 -1.7 3,514,580 + Psest_3347 0.18 +1.0 3,514,580 + Psest_3347 0.18 -0.1 3,514,581 - Psest_3347 0.18 -0.1 3,514,581 - Psest_3347 0.18 -1.8 3,514,581 - Psest_3347 0.18 +0.3 3,514,581 - Psest_3347 0.18 +0.7 3,514,586 + Psest_3347 0.18 -0.1 3,514,586 + Psest_3347 0.18 +0.3 3,514,586 + Psest_3347 0.18 +1.7 3,514,586 + Psest_3347 0.18 +0.1 3,514,587 - Psest_3347 0.18 -0.8 3,514,587 - Psest_3347 0.18 +0.3 3,514,587 - Psest_3347 0.18 +0.3 3,514,781 + Psest_3347 0.26 -2.0 3,514,781 + Psest_3347 0.26 +1.7 3,514,781 + Psest_3347 0.26 +1.1 3,514,781 + Psest_3347 0.26 -1.7 3,514,781 + Psest_3347 0.26 +0.2 3,514,785 + Psest_3347 0.27 +0.3 3,514,786 - Psest_3347 0.27 -2.6 3,514,889 + Psest_3347 0.31 +0.1 3,514,890 - Psest_3347 0.31 +1.3
Or see this region's nucleotide sequence