Experiment: Def 2-Furfuraldehyde 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2949 and Psest_2950 are separated by 69 nucleotides Psest_2950 and Psest_2951 are separated by 173 nucleotides
Psest_2949: Psest_2949 - Aspartyl aminopeptidase, at 3,145,221 to 3,146,510
_2949
Psest_2950: Psest_2950 - putative NAD(P)H quinone oxidoreductase, PIG3 family, at 3,146,580 to 3,147,542
_2950
Psest_2951: Psest_2951 - C-terminal peptidase (prc), at 3,147,716 to 3,149,800
_2951
Position (kb)
3146
3147
3148 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3145.609 kb on - strand, within Psest_2949 at 3145.609 kb on - strand, within Psest_2949 at 3145.609 kb on - strand, within Psest_2949 at 3145.739 kb on - strand, within Psest_2949 at 3145.863 kb on + strand, within Psest_2949 at 3146.166 kb on + strand, within Psest_2949 at 3146.167 kb on - strand, within Psest_2949 at 3146.271 kb on + strand, within Psest_2949 at 3146.272 kb on - strand, within Psest_2949 at 3146.272 kb on - strand, within Psest_2949 at 3146.487 kb on + strand at 3146.487 kb on + strand at 3146.487 kb on + strand at 3146.487 kb on + strand at 3146.487 kb on + strand at 3146.487 kb on + strand at 3146.487 kb on + strand at 3146.487 kb on + strand at 3146.487 kb on + strand at 3146.488 kb on - strand at 3146.488 kb on - strand at 3146.488 kb on - strand at 3146.488 kb on - strand at 3146.488 kb on - strand at 3146.488 kb on - strand at 3146.488 kb on - strand at 3146.488 kb on - strand at 3146.488 kb on - strand at 3146.488 kb on - strand at 3146.488 kb on - strand at 3146.488 kb on - strand at 3146.574 kb on + strand at 3146.575 kb on - strand at 3146.594 kb on + strand at 3146.658 kb on + strand at 3146.659 kb on - strand at 3146.659 kb on - strand at 3146.762 kb on - strand, within Psest_2950 at 3146.904 kb on - strand, within Psest_2950 at 3146.914 kb on + strand, within Psest_2950 at 3146.915 kb on - strand, within Psest_2950 at 3147.187 kb on + strand, within Psest_2950 at 3147.339 kb on + strand, within Psest_2950 at 3147.340 kb on - strand, within Psest_2950 at 3147.383 kb on + strand, within Psest_2950 at 3147.525 kb on - strand at 3147.553 kb on + strand at 3147.562 kb on + strand at 3147.562 kb on + strand at 3147.563 kb on - strand at 3147.563 kb on - strand at 3147.611 kb on + strand at 3147.611 kb on + strand at 3147.612 kb on - strand at 3147.662 kb on + strand at 3147.662 kb on + strand at 3147.667 kb on + strand at 3147.667 kb on + strand at 3147.667 kb on + strand at 3147.676 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def 2-Furfuraldehyde 0.032 vol% remove 3,145,609 - Psest_2949 0.30 +0.4 3,145,609 - Psest_2949 0.30 +1.6 3,145,609 - Psest_2949 0.30 +0.3 3,145,739 - Psest_2949 0.40 -3.1 3,145,863 + Psest_2949 0.50 +0.0 3,146,166 + Psest_2949 0.73 +2.3 3,146,167 - Psest_2949 0.73 -1.0 3,146,271 + Psest_2949 0.81 +0.9 3,146,272 - Psest_2949 0.81 -1.9 3,146,272 - Psest_2949 0.81 -0.4 3,146,487 + +0.1 3,146,487 + +0.4 3,146,487 + -0.1 3,146,487 + -1.0 3,146,487 + +3.5 3,146,487 + +1.4 3,146,487 + -0.4 3,146,487 + +2.7 3,146,487 + +1.1 3,146,488 - -1.1 3,146,488 - -0.8 3,146,488 - +2.3 3,146,488 - +0.2 3,146,488 - +1.3 3,146,488 - -2.1 3,146,488 - -2.5 3,146,488 - -2.9 3,146,488 - +0.1 3,146,488 - +2.4 3,146,488 - +1.9 3,146,488 - +0.3 3,146,574 + -0.2 3,146,575 - +0.9 3,146,594 + +0.4 3,146,658 + +1.0 3,146,659 - -1.6 3,146,659 - +1.0 3,146,762 - Psest_2950 0.19 +2.2 3,146,904 - Psest_2950 0.34 -0.4 3,146,914 + Psest_2950 0.35 +0.1 3,146,915 - Psest_2950 0.35 +2.9 3,147,187 + Psest_2950 0.63 +1.2 3,147,339 + Psest_2950 0.79 +0.2 3,147,340 - Psest_2950 0.79 +2.5 3,147,383 + Psest_2950 0.83 -1.7 3,147,525 - +0.7 3,147,553 + +1.1 3,147,562 + +0.6 3,147,562 + -0.2 3,147,563 - -0.9 3,147,563 - -0.4 3,147,611 + -1.3 3,147,611 + -0.6 3,147,612 - +4.5 3,147,662 + -1.4 3,147,662 + -0.4 3,147,667 + -1.4 3,147,667 + +1.9 3,147,667 + -1.0 3,147,676 + -0.2
Or see this region's nucleotide sequence